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Cluster: CGMR084277_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_57892 k141_57892_1 3 302 + 3.A.2.1.2
pfam k141_57892 k141_57892_2 368 655 + ATP-synt_DE_N
TC k141_57892 k141_57892_3 636 1733 + 3.A.2.1.7
TC k141_57892 k141_57892_4 1738 1953 + 3.A.2.1.6
pfam k141_57892 k141_57892_5 1975 2487 + ATP-synt_B | YMF19
pfam k141_57892 k141_57892_6 2492 3046 + OSCP
TC k141_57892 k141_57892_7 3051 4637 + 3.A.2.1.3
TC k141_57892 k141_57892_8 4643 5512 + 3.A.2.1.1
pfam k141_57892 k141_57892_9 5765 6328 - DUF4924
pfam k141_57892 k141_57892_10 6542 8779 - PHO4 | PHO4
TC k141_57892 k141_57892_11 9178 9891 - 1.C.113.1.1
pfam k141_57892 k141_57892_12 10249 12447 + TGS | RelA_SpoT | ACT_4 | HD_4
CAZyme k141_57892 k141_57892_13 12675 15908 - GH2
Gene ID: k141_57892_1
Type: TC
Location: 3 - 302 (+)
Gene ID: k141_57892_2
Type: pfam
Location: 368 - 655 (+)
Gene ID: k141_57892_3
Type: TC
Location: 636 - 1733 (+)
Gene ID: k141_57892_4
Type: TC
Location: 1738 - 1953 (+)
Gene ID: k141_57892_5
Type: pfam
Location: 1975 - 2487 (+)
Gene ID: k141_57892_6
Type: pfam
Location: 2492 - 3046 (+)
Gene ID: k141_57892_7
Type: TC
Location: 3051 - 4637 (+)
Gene ID: k141_57892_8
Type: TC
Location: 4643 - 5512 (+)
Gene ID: k141_57892_9
Type: pfam
Location: 5765 - 6328 (-)
Gene ID: k141_57892_10
Type: pfam
Location: 6542 - 8779 (-)
Gene ID: k141_57892_11
Type: TC
Location: 9178 - 9891 (-)
Gene ID: k141_57892_12
Type: pfam
Location: 10249 - 12447 (+)
Gene ID: k141_57892_13
Type: CAZyme
Location: 12675 - 15908 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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