Cluster: CGMR084277_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR084277
- CGC Family ID: CGCFAM_07652
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_12610 | k141_12610_6 | 6761 | 7396 | - | 2.A.115.2.14 |
| TC | k141_12610 | k141_12610_7 | 7440 | 8858 | - | 2.A.66.1.32 |
| STP | k141_12610 | k141_12610_8 | 9012 | 9932 | + | PALP |
| CAZyme | k141_12610 | k141_12610_9 | 10085 | 11014 | + | GT2 |
| pfam | k141_12610 | k141_12610_10 | 11027 | 13726 | + | AsmA |
| pfam | k141_12610 | k141_12610_11 | 13795 | 14868 | - | APH |
| CAZyme | k141_12610 | k141_12610_12 | 15055 | 16446 | + | GH109 |
Gene ID: k141_12610_6
Type: TC
Location: 6761 - 7396 (-)
Type: TC
Location: 6761 - 7396 (-)
Gene ID: k141_12610_7
Type: TC
Location: 7440 - 8858 (-)
Type: TC
Location: 7440 - 8858 (-)
Gene ID: k141_12610_8
Type: STP
Location: 9012 - 9932 (+)
Type: STP
Location: 9012 - 9932 (+)
Gene ID: k141_12610_9
Type: CAZyme
Location: 10085 - 11014 (+)
Type: CAZyme
Location: 10085 - 11014 (+)
Gene ID: k141_12610_10
Type: pfam
Location: 11027 - 13726 (+)
Type: pfam
Location: 11027 - 13726 (+)
Gene ID: k141_12610_11
Type: pfam
Location: 13795 - 14868 (-)
Type: pfam
Location: 13795 - 14868 (-)
Gene ID: k141_12610_12
Type: CAZyme
Location: 15055 - 16446 (+)
Type: CAZyme
Location: 15055 - 16446 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp944321175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.