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Cluster: CGMR083912_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_4319 k141_4319_147 163968 165299 - GH4
TC k141_4319 k141_4319_148 165299 166927 - 4.A.1.1.3
TF k141_4319 k141_4319_149 167157 167633 - HTH_6
pfam k141_4319 k141_4319_150 167691 168110 - Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10
TC k141_4319 k141_4319_151 168167 169933 - 2.A.16.2.2
STP k141_4319 k141_4319_152 170052 171167 + Pyr_redox
pfam k141_4319 k141_4319_153 171258 172268 - PRiA4_ORF3
TC k141_4319 k141_4319_154 172335 173873 - 3.A.1.15.3
pfam k141_4319 k141_4319_155 174389 175012 + Ykof | Ykof
TC k141_4319 k141_4319_156 175005 175607 + 3.A.1.30.1
TC k141_4319 k141_4319_157 175604 177016 + 3.A.1.30.1
Gene ID: k141_4319_147
Type: CAZyme
Location: 163968 - 165299 (-)
Gene ID: k141_4319_148
Type: TC
Location: 165299 - 166927 (-)
Gene ID: k141_4319_149
Type: TF
Location: 167157 - 167633 (-)
Gene ID: k141_4319_150
Type: pfam
Location: 167691 - 168110 (-)
Gene ID: k141_4319_151
Type: TC
Location: 168167 - 169933 (-)
Gene ID: k141_4319_152
Type: STP
Location: 170052 - 171167 (+)
Gene ID: k141_4319_153
Type: pfam
Location: 171258 - 172268 (-)
Gene ID: k141_4319_154
Type: TC
Location: 172335 - 173873 (-)
Gene ID: k141_4319_155
Type: pfam
Location: 174389 - 175012 (+)
Gene ID: k141_4319_156
Type: TC
Location: 175005 - 175607 (+)
Gene ID: k141_4319_157
Type: TC
Location: 175604 - 177016 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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