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Cluster: CGMR083912_CGC63

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_40496 k141_40496_239 258904 261054 - GH92
TF k141_40496 k141_40496_240 261060 262112 - GntR
CAZyme k141_40496 k141_40496_241 262268 263557 + GH125
CAZyme k141_40496 k141_40496_242 263631 266309 + GH38
pfam k141_40496 k141_40496_243 266313 267188 + ROK
CAZyme k141_40496 k141_40496_244 267181 268572 + GH1
TC k141_40496 k141_40496_245 268759 269694 + 3.A.1.1.29
TC k141_40496 k141_40496_246 269708 270628 + 3.A.1.1.29
STP k141_40496 k141_40496_247 270656 272125 + SBP_bac_1
pfam k141_40496 k141_40496_248 272404 273024 + DUF624
TC k141_40496 k141_40496_249 273017 274765 + 8.A.59.2.1
Gene ID: k141_40496_239
Type: CAZyme
Location: 258904 - 261054 (-)
Gene ID: k141_40496_240
Type: TF
Location: 261060 - 262112 (-)
Gene ID: k141_40496_241
Type: CAZyme
Location: 262268 - 263557 (+)
Gene ID: k141_40496_242
Type: CAZyme
Location: 263631 - 266309 (+)
Gene ID: k141_40496_243
Type: pfam
Location: 266313 - 267188 (+)
Gene ID: k141_40496_244
Type: CAZyme
Location: 267181 - 268572 (+)
Gene ID: k141_40496_245
Type: TC
Location: 268759 - 269694 (+)
Gene ID: k141_40496_246
Type: TC
Location: 269708 - 270628 (+)
Gene ID: k141_40496_247
Type: STP
Location: 270656 - 272125 (+)
Gene ID: k141_40496_248
Type: pfam
Location: 272404 - 273024 (+)
Gene ID: k141_40496_249
Type: TC
Location: 273017 - 274765 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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