dbCAN Logo

Cluster: CGMR083912_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_27953 k141_27953_21 19126 19965 + 8.A.5.1.4
NULL(UNKNOWN) k141_27953 k141_27953_22 19992 20273 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_27953 k141_27953_23 20388 21107 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_27953 k141_27953_24 21146 23620 - 2.A.6.6.11
pfam k141_27953 k141_27953_25 23813 24973 + HMG_CoA_synt_N | HMG_CoA_synt_C | HMG_CoA_synt_C
TC k141_27953 k141_27953_26 25472 26449 + 3.A.1.34.1
TC k141_27953 k141_27953_27 26479 27399 + 3.A.1.34.1
TC k141_27953 k141_27953_28 27399 28205 + 3.A.1.34.1
TC k141_27953 k141_27953_29 28281 28925 - 3.A.2.2.2
TC k141_27953 k141_27953_30 28925 30313 - 3.A.2.2.2
TC k141_27953 k141_27953_31 30313 32088 - 3.A.2.2.2
pfam k141_27953 k141_27953_32 32120 32434 - ATP-synt_F
TC k141_27953 k141_27953_33 32427 33428 - 3.A.2.2.2
pfam k141_27953 k141_27953_34 33443 34033 - vATP-synt_E
TC k141_27953 k141_27953_35 34050 34523 - 3.A.2.2.2
TC k141_27953 k141_27953_36 34507 36498 - 3.A.2.2.2
NULL(UNKNOWN) k141_27953 k141_27953_37 36499 36810 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_27953 k141_27953_38 37195 38412 - ADI | DDAH_eukar
CAZyme k141_27953 k141_27953_39 38846 40843 + GH42
Gene ID: k141_27953_21
Type: TC
Location: 19126 - 19965 (+)
Gene ID: k141_27953_22
Type:
Location: 19992 - 20273 (+)
Gene ID: k141_27953_23
Type:
Location: 20388 - 21107 (+)
Gene ID: k141_27953_24
Type: TC
Location: 21146 - 23620 (-)
Gene ID: k141_27953_25
Type: pfam
Location: 23813 - 24973 (+)
Gene ID: k141_27953_26
Type: TC
Location: 25472 - 26449 (+)
Gene ID: k141_27953_27
Type: TC
Location: 26479 - 27399 (+)
Gene ID: k141_27953_28
Type: TC
Location: 27399 - 28205 (+)
Gene ID: k141_27953_29
Type: TC
Location: 28281 - 28925 (-)
Gene ID: k141_27953_30
Type: TC
Location: 28925 - 30313 (-)
Gene ID: k141_27953_31
Type: TC
Location: 30313 - 32088 (-)
Gene ID: k141_27953_32
Type: pfam
Location: 32120 - 32434 (-)
Gene ID: k141_27953_33
Type: TC
Location: 32427 - 33428 (-)
Gene ID: k141_27953_34
Type: pfam
Location: 33443 - 34033 (-)
Gene ID: k141_27953_35
Type: TC
Location: 34050 - 34523 (-)
Gene ID: k141_27953_36
Type: TC
Location: 34507 - 36498 (-)
Gene ID: k141_27953_37
Type:
Location: 36499 - 36810 (-)
Gene ID: k141_27953_38
Type: pfam
Location: 37195 - 38412 (-)
Gene ID: k141_27953_39
Type: CAZyme
Location: 38846 - 40843 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List