Cluster: CGMR083912_CGC52
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR083912
- CGC Family ID: CGCFAM_02078
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_19840 | k141_19840_166 | 186167 | 188002 | - | GH154 |
| NULL(UNKNOWN) | k141_19840 | k141_19840_167 | 188172 | 189020 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_19840 | k141_19840_168 | 189017 | 190684 | + | PL33_2 |
| TF | k141_19840 | k141_19840_169 | 190744 | 191787 | - | LacI |
| NULL(UNKNOWN) | k141_19840 | k141_19840_170 | 191965 | 192387 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_19840 | k141_19840_171 | 192350 | 194191 | + | GH154 |
| CAZyme | k141_19840 | k141_19840_172 | 194175 | 195326 | + | GH88 |
| STP | k141_19840 | k141_19840_173 | 195372 | 196643 | + | SBP_bac_1 |
| TC | k141_19840 | k141_19840_174 | 196730 | 197632 | + | 3.A.1.1.11 |
| TC | k141_19840 | k141_19840_175 | 197646 | 198518 | + | 3.A.1.1.36 |
| TC | k141_19840 | k141_19840_176 | 198530 | 199186 | + | 9.B.28.3.1 |
| pfam | k141_19840 | k141_19840_177 | 199247 | 199789 | + | Acetyltransf_1 | Acetyltransf_3 |
| TC | k141_19840 | k141_19840_178 | 200013 | 200786 | + | 3.A.1.5.37 |
Gene ID: k141_19840_166
Type: CAZyme
Location: 186167 - 188002 (-)
Type: CAZyme
Location: 186167 - 188002 (-)
Gene ID: k141_19840_167
Type:
Location: 188172 - 189020 (+)
Type:
Location: 188172 - 189020 (+)
Gene ID: k141_19840_168
Type: CAZyme
Location: 189017 - 190684 (+)
Type: CAZyme
Location: 189017 - 190684 (+)
Gene ID: k141_19840_169
Type: TF
Location: 190744 - 191787 (-)
Type: TF
Location: 190744 - 191787 (-)
Gene ID: k141_19840_170
Type:
Location: 191965 - 192387 (+)
Type:
Location: 191965 - 192387 (+)
Gene ID: k141_19840_171
Type: CAZyme
Location: 192350 - 194191 (+)
Type: CAZyme
Location: 192350 - 194191 (+)
Gene ID: k141_19840_172
Type: CAZyme
Location: 194175 - 195326 (+)
Type: CAZyme
Location: 194175 - 195326 (+)
Gene ID: k141_19840_173
Type: STP
Location: 195372 - 196643 (+)
Type: STP
Location: 195372 - 196643 (+)
Gene ID: k141_19840_174
Type: TC
Location: 196730 - 197632 (+)
Type: TC
Location: 196730 - 197632 (+)
Gene ID: k141_19840_175
Type: TC
Location: 197646 - 198518 (+)
Type: TC
Location: 197646 - 198518 (+)
Gene ID: k141_19840_176
Type: TC
Location: 198530 - 199186 (+)
Type: TC
Location: 198530 - 199186 (+)
Gene ID: k141_19840_177
Type: pfam
Location: 199247 - 199789 (+)
Type: pfam
Location: 199247 - 199789 (+)
Gene ID: k141_19840_178
Type: TC
Location: 200013 - 200786 (+)
Type: TC
Location: 200013 - 200786 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_D
Species
Enterococcus_D casseliflavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.