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Cluster: CGMR083912_CGC51

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_19840 k141_19840_118 127903 130608 + 9.B.74.1.1
TC k141_19840 k141_19840_119 130805 132649 + 2.A.3.14.3
TF k141_19840 k141_19840_120 132722 133612 - HTH_5
STP k141_19840 k141_19840_121 133928 135178 + SBP_bac_1
TC k141_19840 k141_19840_122 135234 136115 + 3.A.1.1.20
TC k141_19840 k141_19840_123 136128 136979 + 3.A.1.1.20
NULL(UNKNOWN) k141_19840 k141_19840_124 136988 137404 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_19840 k141_19840_125 137420 138376 + GH43_26
CAZyme k141_19840 k141_19840_126 138395 140017 + GH43_4
CAZyme k141_19840 k141_19840_127 140028 141473 + GH51_1
pfam k141_19840 k141_19840_128 141499 141744 + DUF6171
TF k141_19840 k141_19840_129 141882 142808 + HTH_AraC
CAZyme k141_19840 k141_19840_130 142842 144842 + GH31_4
CAZyme k141_19840 k141_19840_131 144966 146231 - GH27
TF k141_19840 k141_19840_132 146352 147251 + HTH_AraC | HTH_AraC
TC k141_19840 k141_19840_133 147301 148935 + 9.B.33.1.1
TF k141_19840 k141_19840_134 148910 150460 + HTH_AraC | HTH_AraC
TC k141_19840 k141_19840_135 150582 152168 + 3.A.1.1.10
TC k141_19840 k141_19840_136 152271 153194 + 3.A.1.1.10
TC k141_19840 k141_19840_137 153207 154100 + 3.A.1.1.10
pfam k141_19840 k141_19840_138 154105 154737 + DUF624
CAZyme k141_19840 k141_19840_139 154787 156727 + GH127
pfam k141_19840 k141_19840_140 156875 157222 + PhdYeFM_antitox
CAZyme k141_19840 k141_19840_141 157596 160427 + CBM32 | GH85
TC k141_19840 k141_19840_142 160559 161221 - 3.A.1.12.4
TC k141_19840 k141_19840_143 161226 162146 - 3.A.1.12.4
TC k141_19840 k141_19840_144 162146 162781 - 3.A.1.12.4
TC k141_19840 k141_19840_145 162785 163960 - 3.A.1.12.4
Gene ID: k141_19840_118
Type: TC
Location: 127903 - 130608 (+)
Gene ID: k141_19840_119
Type: TC
Location: 130805 - 132649 (+)
Gene ID: k141_19840_120
Type: TF
Location: 132722 - 133612 (-)
Gene ID: k141_19840_121
Type: STP
Location: 133928 - 135178 (+)
Gene ID: k141_19840_122
Type: TC
Location: 135234 - 136115 (+)
Gene ID: k141_19840_123
Type: TC
Location: 136128 - 136979 (+)
Gene ID: k141_19840_124
Type:
Location: 136988 - 137404 (+)
Gene ID: k141_19840_125
Type: CAZyme
Location: 137420 - 138376 (+)
Gene ID: k141_19840_126
Type: CAZyme
Location: 138395 - 140017 (+)
Gene ID: k141_19840_127
Type: CAZyme
Location: 140028 - 141473 (+)
Gene ID: k141_19840_128
Type: pfam
Location: 141499 - 141744 (+)
Gene ID: k141_19840_129
Type: TF
Location: 141882 - 142808 (+)
Gene ID: k141_19840_130
Type: CAZyme
Location: 142842 - 144842 (+)
Gene ID: k141_19840_131
Type: CAZyme
Location: 144966 - 146231 (-)
Gene ID: k141_19840_132
Type: TF
Location: 146352 - 147251 (+)
Gene ID: k141_19840_133
Type: TC
Location: 147301 - 148935 (+)
Gene ID: k141_19840_134
Type: TF
Location: 148910 - 150460 (+)
Gene ID: k141_19840_135
Type: TC
Location: 150582 - 152168 (+)
Gene ID: k141_19840_136
Type: TC
Location: 152271 - 153194 (+)
Gene ID: k141_19840_137
Type: TC
Location: 153207 - 154100 (+)
Gene ID: k141_19840_138
Type: pfam
Location: 154105 - 154737 (+)
Gene ID: k141_19840_139
Type: CAZyme
Location: 154787 - 156727 (+)
Gene ID: k141_19840_140
Type: pfam
Location: 156875 - 157222 (+)
Gene ID: k141_19840_141
Type: CAZyme
Location: 157596 - 160427 (+)
Gene ID: k141_19840_142
Type: TC
Location: 160559 - 161221 (-)
Gene ID: k141_19840_143
Type: TC
Location: 161226 - 162146 (-)
Gene ID: k141_19840_144
Type: TC
Location: 162146 - 162781 (-)
Gene ID: k141_19840_145
Type: TC
Location: 162785 - 163960 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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