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Cluster: CGMR083912_CGC50

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_19840 k141_19840_57 58492 59568 + 3.A.1.24.6
TC k141_19840 k141_19840_58 59569 60249 + 3.A.1.24.3
TC k141_19840 k141_19840_59 60302 61141 + 3.A.1.24.6
peptidase k141_19840 k141_19840_60 61201 62409 + M20.UPD
pfam k141_19840 k141_19840_61 62488 63051 - Pep_deformylase
CAZyme k141_19840 k141_19840_62 63298 64362 + GH170
STP k141_19840 k141_19840_63 64355 65263 + SIS
TC k141_19840 k141_19840_64 65263 67275 + 4.A.1.2.7
pfam k141_19840 k141_19840_65 67404 68435 + Gram_pos_anchor
STP k141_19840 k141_19840_66 68702 69370 + TetR_N
TC k141_19840 k141_19840_67 69363 71090 + 3.A.1.135.9
TC k141_19840 k141_19840_68 71087 72967 + 3.A.1.135.6
Gene ID: k141_19840_57
Type: TC
Location: 58492 - 59568 (+)
Gene ID: k141_19840_58
Type: TC
Location: 59569 - 60249 (+)
Gene ID: k141_19840_59
Type: TC
Location: 60302 - 61141 (+)
Gene ID: k141_19840_60
Type: peptidase
Location: 61201 - 62409 (+)
Gene ID: k141_19840_61
Type: pfam
Location: 62488 - 63051 (-)
Gene ID: k141_19840_62
Type: CAZyme
Location: 63298 - 64362 (+)
Gene ID: k141_19840_63
Type: STP
Location: 64355 - 65263 (+)
Gene ID: k141_19840_64
Type: TC
Location: 65263 - 67275 (+)
Gene ID: k141_19840_65
Type: pfam
Location: 67404 - 68435 (+)
Gene ID: k141_19840_66
Type: STP
Location: 68702 - 69370 (+)
Gene ID: k141_19840_67
Type: TC
Location: 69363 - 71090 (+)
Gene ID: k141_19840_68
Type: TC
Location: 71087 - 72967 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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