Cluster: CGMR083912_CGC39
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR083912
- CGC Family ID: CGCFAM_08865
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6270 | k141_6270_164 | 182275 | 183624 | - | 2.A.55.2.6 |
| TC | k141_6270 | k141_6270_165 | 183781 | 186123 | - | 3.A.1.122.13 |
| TF | k141_6270 | k141_6270_166 | 186262 | 186747 | + | MarR |
| CAZyme | k141_6270 | k141_6270_167 | 186908 | 188695 | + | CBM34 | GH13_20 |
| pfam | k141_6270 | k141_6270_168 | 189000 | 190052 | + | Semialdhyde_dh | Semialdhyde_dhC |
| pfam | k141_6270 | k141_6270_169 | 190175 | 191857 | + | Lactamase_B | RMMBL | Lactamase_B_2 | RNase_J_C | RNase_J_b_CASP |
| TC | k141_6270 | k141_6270_170 | 192100 | 193539 | + | 2.A.1.3.17 |
Gene ID: k141_6270_164
Type: TC
Location: 182275 - 183624 (-)
Type: TC
Location: 182275 - 183624 (-)
Gene ID: k141_6270_165
Type: TC
Location: 183781 - 186123 (-)
Type: TC
Location: 183781 - 186123 (-)
Gene ID: k141_6270_166
Type: TF
Location: 186262 - 186747 (+)
Type: TF
Location: 186262 - 186747 (+)
Gene ID: k141_6270_167
Type: CAZyme
Location: 186908 - 188695 (+)
Type: CAZyme
Location: 186908 - 188695 (+)
Gene ID: k141_6270_168
Type: pfam
Location: 189000 - 190052 (+)
Type: pfam
Location: 189000 - 190052 (+)
Gene ID: k141_6270_169
Type: pfam
Location: 190175 - 191857 (+)
Type: pfam
Location: 190175 - 191857 (+)
Gene ID: k141_6270_170
Type: TC
Location: 192100 - 193539 (+)
Type: TC
Location: 192100 - 193539 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_D
Species
Enterococcus_D casseliflavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.