Cluster: CGMR083912_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR083912
- CGC Family ID: CGCFAM_01922
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_17954 | k141_17954_40 | 40621 | 41355 | + | 8.A.3.2.4 |
| TC | k141_17954 | k141_17954_41 | 41355 | 41996 | + | 8.A.3.2.1 |
| TC | k141_17954 | k141_17954_42 | 42010 | 42657 | + | 9.B.18.1.2 |
| CAZyme | k141_17954 | k141_17954_43 | 42657 | 43403 | + | GT26 |
| pfam | k141_17954 | k141_17954_44 | 43400 | 44653 | + | O-antigen_lig | O-antigen_lig |
| pfam | k141_17954 | k141_17954_45 | 44662 | 46077 | + | Polysacc_synt | Polysacc_synt_3 |
| CAZyme | k141_17954 | k141_17954_46 | 46074 | 47105 | + | GT4 |
Gene ID: k141_17954_40
Type: TC
Location: 40621 - 41355 (+)
Type: TC
Location: 40621 - 41355 (+)
Gene ID: k141_17954_41
Type: TC
Location: 41355 - 41996 (+)
Type: TC
Location: 41355 - 41996 (+)
Gene ID: k141_17954_42
Type: TC
Location: 42010 - 42657 (+)
Type: TC
Location: 42010 - 42657 (+)
Gene ID: k141_17954_43
Type: CAZyme
Location: 42657 - 43403 (+)
Type: CAZyme
Location: 42657 - 43403 (+)
Gene ID: k141_17954_44
Type: pfam
Location: 43400 - 44653 (+)
Type: pfam
Location: 43400 - 44653 (+)
Gene ID: k141_17954_45
Type: pfam
Location: 44662 - 46077 (+)
Type: pfam
Location: 44662 - 46077 (+)
Gene ID: k141_17954_46
Type: CAZyme
Location: 46074 - 47105 (+)
Type: CAZyme
Location: 46074 - 47105 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_D
Species
Enterococcus_D casseliflavus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.