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Cluster: CGMR083912_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_20759 k141_20759_243 245394 247151 - 3.A.1.129.1
TC k141_20759 k141_20759_244 247144 248865 - 3.A.1.129.1
TC k141_20759 k141_20759_245 248862 249881 - 3.D.4.3.2
TC k141_20759 k141_20759_246 249878 251308 - 3.D.4.3.2
TF k141_20759 k141_20759_247 251496 252455 - HTH_3
TC k141_20759 k141_20759_248 252551 253492 + 3.A.1.105.13
pfam k141_20759 k141_20759_249 253489 254241 + ABC2_membrane | ABC2_membrane_3
pfam k141_20759 k141_20759_250 254302 254658 + YjbR
CAZyme k141_20759 k141_20759_251 254767 256209 - GH1
TC k141_20759 k141_20759_252 256591 257898 - 4.A.3.2.2
TC k141_20759 k141_20759_253 258224 259537 - 4.A.3.2.8
CAZyme k141_20759 k141_20759_254 259545 260825 - GH140
Gene ID: k141_20759_243
Type: TC
Location: 245394 - 247151 (-)
Gene ID: k141_20759_244
Type: TC
Location: 247144 - 248865 (-)
Gene ID: k141_20759_245
Type: TC
Location: 248862 - 249881 (-)
Gene ID: k141_20759_246
Type: TC
Location: 249878 - 251308 (-)
Gene ID: k141_20759_247
Type: TF
Location: 251496 - 252455 (-)
Gene ID: k141_20759_248
Type: TC
Location: 252551 - 253492 (+)
Gene ID: k141_20759_249
Type: pfam
Location: 253489 - 254241 (+)
Gene ID: k141_20759_250
Type: pfam
Location: 254302 - 254658 (+)
Gene ID: k141_20759_251
Type: CAZyme
Location: 254767 - 256209 (-)
Gene ID: k141_20759_252
Type: TC
Location: 256591 - 257898 (-)
Gene ID: k141_20759_253
Type: TC
Location: 258224 - 259537 (-)
Gene ID: k141_20759_254
Type: CAZyme
Location: 259545 - 260825 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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