Cluster: CGMR083857_CGC17
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR083857
- CGC Family ID: CGCFAM_02806
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_77381 | k141_77381_62 | 56531 | 58405 | + | 9.B.106.2.2 |
| TC | k141_77381 | k141_77381_63 | 58493 | 59251 | + | 2.A.79.1.5 |
| pfam | k141_77381 | k141_77381_64 | 59253 | 59702 | + | ThrE_2 |
| pfam | k141_77381 | k141_77381_65 | 59879 | 61051 | + | Chal_sti_synt_N | HMG_CoA_synt_N | HMG_CoA_synt_C | HMG_CoA_synt_C |
| TC | k141_77381 | k141_77381_66 | 61051 | 62325 | + | 2.A.6.6.11 |
| TF | k141_77381 | k141_77381_67 | 62364 | 63329 | - | LacI |
| CAZyme | k141_77381 | k141_77381_68 | 63310 | 64764 | - | GH32 |
| TC | k141_77381 | k141_77381_69 | 65128 | 67023 | + | 4.A.1.2.12 |
| pfam | k141_77381 | k141_77381_70 | 67330 | 68217 | + | ROK |
| TC | k141_77381 | k141_77381_71 | 68258 | 69448 | - | 2.A.4.7.6 |
| NULL(UNKNOWN) | k141_77381 | k141_77381_72 | 69610 | 71040 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_77381 | k141_77381_73 | 71042 | 72013 | + | GT2 |
| NULL(UNKNOWN) | k141_77381 | k141_77381_74 | 72075 | 73898 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_77381 | k141_77381_75 | 74089 | 76773 | + | 3.A.3.2.28 |
Gene ID: k141_77381_62
Type: TC
Location: 56531 - 58405 (+)
Type: TC
Location: 56531 - 58405 (+)
Gene ID: k141_77381_63
Type: TC
Location: 58493 - 59251 (+)
Type: TC
Location: 58493 - 59251 (+)
Gene ID: k141_77381_64
Type: pfam
Location: 59253 - 59702 (+)
Type: pfam
Location: 59253 - 59702 (+)
Gene ID: k141_77381_65
Type: pfam
Location: 59879 - 61051 (+)
Type: pfam
Location: 59879 - 61051 (+)
Gene ID: k141_77381_66
Type: TC
Location: 61051 - 62325 (+)
Type: TC
Location: 61051 - 62325 (+)
Gene ID: k141_77381_67
Type: TF
Location: 62364 - 63329 (-)
Type: TF
Location: 62364 - 63329 (-)
Gene ID: k141_77381_68
Type: CAZyme
Location: 63310 - 64764 (-)
Type: CAZyme
Location: 63310 - 64764 (-)
Gene ID: k141_77381_69
Type: TC
Location: 65128 - 67023 (+)
Type: TC
Location: 65128 - 67023 (+)
Gene ID: k141_77381_70
Type: pfam
Location: 67330 - 68217 (+)
Type: pfam
Location: 67330 - 68217 (+)
Gene ID: k141_77381_71
Type: TC
Location: 68258 - 69448 (-)
Type: TC
Location: 68258 - 69448 (-)
Gene ID: k141_77381_72
Type:
Location: 69610 - 71040 (+)
Type:
Location: 69610 - 71040 (+)
Gene ID: k141_77381_73
Type: CAZyme
Location: 71042 - 72013 (+)
Type: CAZyme
Location: 71042 - 72013 (+)
Gene ID: k141_77381_74
Type:
Location: 72075 - 73898 (+)
Type:
Location: 72075 - 73898 (+)
Gene ID: k141_77381_75
Type: TC
Location: 74089 - 76773 (+)
Type: TC
Location: 74089 - 76773 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.