Cluster: CGMR083857_CGC16
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR083857
- CGC Family ID: CGCFAM_00402
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_20761 | k141_20761_14 | 13053 | 14105 | - | GT113 |
| STP | k141_20761 | k141_20761_15 | 14133 | 15236 | - | Pyr_redox |
| TC | k141_20761 | k141_20761_16 | 15246 | 16658 | - | 2.A.66.2.16 |
| NULL(UNKNOWN) | k141_20761 | k141_20761_17 | 16655 | 17815 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_20761 | k141_20761_18 | 17830 | 18816 | - | GT2 |
| pfam | k141_20761 | k141_20761_19 | 18851 | 19852 | - | Stealth_CR2 | Stealth_CR1 | Stealth_CR3 |
| CAZyme | k141_20761 | k141_20761_20 | 19868 | 21022 | - | GT4 |
| CAZyme | k141_20761 | k141_20761_21 | 21025 | 22197 | - | GT4 |
| TC | k141_20761 | k141_20761_22 | 22231 | 23601 | - | 9.B.18.1.2 |
| pfam | k141_20761 | k141_20761_23 | 23715 | 25163 | - | DNA_PPF | LytR_cpsA_psr |
| TC | k141_20761 | k141_20761_24 | 25355 | 27313 | - | 3.A.1.5.25 |
| TC | k141_20761 | k141_20761_25 | 27472 | 29439 | - | 3.A.1.5.19 |
| CAZyme | k141_20761 | k141_20761_26 | 29609 | 31219 | - | GH13_31 |
Gene ID: k141_20761_14
Type: CAZyme
Location: 13053 - 14105 (-)
Type: CAZyme
Location: 13053 - 14105 (-)
Gene ID: k141_20761_15
Type: STP
Location: 14133 - 15236 (-)
Type: STP
Location: 14133 - 15236 (-)
Gene ID: k141_20761_16
Type: TC
Location: 15246 - 16658 (-)
Type: TC
Location: 15246 - 16658 (-)
Gene ID: k141_20761_17
Type:
Location: 16655 - 17815 (-)
Type:
Location: 16655 - 17815 (-)
Gene ID: k141_20761_18
Type: CAZyme
Location: 17830 - 18816 (-)
Type: CAZyme
Location: 17830 - 18816 (-)
Gene ID: k141_20761_19
Type: pfam
Location: 18851 - 19852 (-)
Type: pfam
Location: 18851 - 19852 (-)
Gene ID: k141_20761_20
Type: CAZyme
Location: 19868 - 21022 (-)
Type: CAZyme
Location: 19868 - 21022 (-)
Gene ID: k141_20761_21
Type: CAZyme
Location: 21025 - 22197 (-)
Type: CAZyme
Location: 21025 - 22197 (-)
Gene ID: k141_20761_22
Type: TC
Location: 22231 - 23601 (-)
Type: TC
Location: 22231 - 23601 (-)
Gene ID: k141_20761_23
Type: pfam
Location: 23715 - 25163 (-)
Type: pfam
Location: 23715 - 25163 (-)
Gene ID: k141_20761_24
Type: TC
Location: 25355 - 27313 (-)
Type: TC
Location: 25355 - 27313 (-)
Gene ID: k141_20761_25
Type: TC
Location: 27472 - 29439 (-)
Type: TC
Location: 27472 - 29439 (-)
Gene ID: k141_20761_26
Type: CAZyme
Location: 29609 - 31219 (-)
Type: CAZyme
Location: 29609 - 31219 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.