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Cluster: CGMR083675_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_42137 k141_42137_66 82605 83246 - 5.A.3.3.2
TC k141_42137 k141_42137_67 83243 85663 - 5.A.3.3.2
TF k141_42137 k141_42137_68 86111 86896 + HTH_AraC | HTH_AraC
TC k141_42137 k141_42137_69 87397 88857 + 2.A.3.2.7
pfam k141_42137 k141_42137_70 88947 91319 + OKR_DC_1 | OKR_DC_1_N | OKR_DC_1_C
TC k141_42137 k141_42137_71 91403 92914 + 2.A.3.2.7
TC k141_42137 k141_42137_72 92976 94499 - 2.A.1.3.43
STP k141_42137 k141_42137_73 94586 95140 + TetR_N
TC k141_42137 k141_42137_74 95205 95960 - 3.A.1.14.7
pfam k141_42137 k141_42137_75 95962 96969 - ABC-3 | FecCD
TC k141_42137 k141_42137_76 96956 97918 - 3.A.1.14.2
TC k141_42137 k141_42137_77 97915 98886 - 3.A.1.14.8
TC k141_42137 k141_42137_78 99339 99665 + 4.A.3.2.1
TC k141_42137 k141_42137_79 99759 101117 + 4.A.3.2.7
TC k141_42137 k141_42137_80 101179 101526 + 4.A.3.2.1
TF k141_42137 k141_42137_81 101528 102385 + HTH_AraC | HTH_AraC
CAZyme k141_42137 k141_42137_82 102547 103902 + GH4
pfam k141_42137 k141_42137_83 103939 104703 + YdjC
pfam k141_42137 k141_42137_84 104822 105331 - OMP_b-brl
TC k141_42137 k141_42137_85 105405 105965 - 1.B.6.2.20
Gene ID: k141_42137_66
Type: TC
Location: 82605 - 83246 (-)
Gene ID: k141_42137_67
Type: TC
Location: 83243 - 85663 (-)
Gene ID: k141_42137_68
Type: TF
Location: 86111 - 86896 (+)
Gene ID: k141_42137_69
Type: TC
Location: 87397 - 88857 (+)
Gene ID: k141_42137_70
Type: pfam
Location: 88947 - 91319 (+)
Gene ID: k141_42137_71
Type: TC
Location: 91403 - 92914 (+)
Gene ID: k141_42137_72
Type: TC
Location: 92976 - 94499 (-)
Gene ID: k141_42137_73
Type: STP
Location: 94586 - 95140 (+)
Gene ID: k141_42137_74
Type: TC
Location: 95205 - 95960 (-)
Gene ID: k141_42137_75
Type: pfam
Location: 95962 - 96969 (-)
Gene ID: k141_42137_76
Type: TC
Location: 96956 - 97918 (-)
Gene ID: k141_42137_77
Type: TC
Location: 97915 - 98886 (-)
Gene ID: k141_42137_78
Type: TC
Location: 99339 - 99665 (+)
Gene ID: k141_42137_79
Type: TC
Location: 99759 - 101117 (+)
Gene ID: k141_42137_80
Type: TC
Location: 101179 - 101526 (+)
Gene ID: k141_42137_81
Type: TF
Location: 101528 - 102385 (+)
Gene ID: k141_42137_82
Type: CAZyme
Location: 102547 - 103902 (+)
Gene ID: k141_42137_83
Type: pfam
Location: 103939 - 104703 (+)
Gene ID: k141_42137_84
Type: pfam
Location: 104822 - 105331 (-)
Gene ID: k141_42137_85
Type: TC
Location: 105405 - 105965 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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