dbCAN Logo

Cluster: CGMR083675_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_45236 k141_45236_32 33371 34381 + 3.A.1.13.1
TC k141_45236 k141_45236_33 34383 35132 + 3.A.1.13.1
STP k141_45236 k141_45236_34 35267 36412 + Aminotran_1_2
CAZyme k141_45236 k141_45236_35 36413 37393 + GT2
pfam k141_45236 k141_45236_36 37393 39375 + Formyl_trans_N | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
pfam k141_45236 k141_45236_37 39385 40278 + Polysacc_deac_1
CAZyme k141_45236 k141_45236_38 40286 41950 + GT83
TC k141_45236 k141_45236_39 41950 42291 + 2.A.7.22.1
TC k141_45236 k141_45236_40 42288 42686 + 2.A.7.22.1
Gene ID: k141_45236_32
Type: TC
Location: 33371 - 34381 (+)
Gene ID: k141_45236_33
Type: TC
Location: 34383 - 35132 (+)
Gene ID: k141_45236_34
Type: STP
Location: 35267 - 36412 (+)
Gene ID: k141_45236_35
Type: CAZyme
Location: 36413 - 37393 (+)
Gene ID: k141_45236_36
Type: pfam
Location: 37393 - 39375 (+)
Gene ID: k141_45236_37
Type: pfam
Location: 39385 - 40278 (+)
Gene ID: k141_45236_38
Type: CAZyme
Location: 40286 - 41950 (+)
Gene ID: k141_45236_39
Type: TC
Location: 41950 - 42291 (+)
Gene ID: k141_45236_40
Type: TC
Location: 42288 - 42686 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List