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Cluster: CGMR083675_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_54400 k141_54400_33 30820 32031 - GT4
pfam k141_54400 k141_54400_34 32031 33161 - Epimerase_2
pfam k141_54400 k141_54400_35 33161 34261 - Epimerase | Polysacc_synt_C
TC k141_54400 k141_54400_36 34279 35298 - 9.B.18.2.1
CAZyme k141_54400 k141_54400_37 35303 36379 - GT4
pfam k141_54400 k141_54400_38 36369 37502 - EpsG
pfam k141_54400 k141_54400_39 37499 38902 - Polysacc_synt | Polysacc_synt_3
CAZyme k141_54400 k141_54400_40 38892 39968 - GT4
CAZyme k141_54400 k141_54400_41 39961 41061 - GT4
Gene ID: k141_54400_33
Type: CAZyme
Location: 30820 - 32031 (-)
Gene ID: k141_54400_34
Type: pfam
Location: 32031 - 33161 (-)
Gene ID: k141_54400_35
Type: pfam
Location: 33161 - 34261 (-)
Gene ID: k141_54400_36
Type: TC
Location: 34279 - 35298 (-)
Gene ID: k141_54400_37
Type: CAZyme
Location: 35303 - 36379 (-)
Gene ID: k141_54400_38
Type: pfam
Location: 36369 - 37502 (-)
Gene ID: k141_54400_39
Type: pfam
Location: 37499 - 38902 (-)
Gene ID: k141_54400_40
Type: CAZyme
Location: 38892 - 39968 (-)
Gene ID: k141_54400_41
Type: CAZyme
Location: 39961 - 41061 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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