Cluster: CGMR083522_CGC8
🧬 Cluster Details
- Gene Count: 22
- CAZyme Count: 8
- Substrate:
- Genome ID: CGMR083522
- CGC Family ID: CGCFAM_00402
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_12295 | k141_12295_1 | 3 | 5768 | - | GH84 |
| CAZyme | k141_12295 | k141_12295_2 | 5838 | 8105 | - | GH20 |
| CAZyme | k141_12295 | k141_12295_3 | 8245 | 14559 | - | GH101 |
| TC | k141_12295 | k141_12295_4 | 14828 | 16810 | - | 3.A.1.5.25 |
| CAZyme | k141_12295 | k141_12295_5 | 17118 | 18170 | - | GT113 |
| STP | k141_12295 | k141_12295_6 | 18195 | 19292 | - | Pyr_redox |
| NULL(UNKNOWN) | k141_12295 | k141_12295_7 | 19426 | 20574 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_12295 | k141_12295_8 | 20754 | 22169 | - | 2.A.66.2.16 |
| CAZyme | k141_12295 | k141_12295_9 | 22176 | 23141 | - | GT2 |
| pfam | k141_12295 | k141_12295_10 | 23141 | 24235 | - | Epimerase_2 |
| CAZyme | k141_12295 | k141_12295_11 | 24232 | 24696 | - | GT4 |
| pfam | k141_12295 | k141_12295_12 | 24683 | 25303 | - | Glyco_transf_4 | Glyco_trans_4_2 |
| CAZyme | k141_12295 | k141_12295_13 | 25278 | 26042 | - | GT26 |
| pfam | k141_12295 | k141_12295_14 | 26020 | 26805 | - | LicD |
| TC | k141_12295 | k141_12295_15 | 26810 | 28177 | - | 9.B.18.1.2 |
| TC | k141_12295 | k141_12295_16 | 28200 | 28883 | - | 8.A.3.2.2 |
| TC | k141_12295 | k141_12295_17 | 28893 | 29585 | - | 8.A.3.2.3 |
| pfam | k141_12295 | k141_12295_18 | 29594 | 30325 | - | CpsB_CapC |
| pfam | k141_12295 | k141_12295_19 | 30327 | 31772 | - | DNA_PPF | LytR_cpsA_psr |
| TC | k141_12295 | k141_12295_20 | 31964 | 33922 | - | 3.A.1.5.19 |
| TC | k141_12295 | k141_12295_21 | 34082 | 36049 | - | 3.A.1.5.25 |
| CAZyme | k141_12295 | k141_12295_22 | 36219 | 37829 | - | GH13_31 |
Gene ID: k141_12295_1
Type: CAZyme
Location: 3 - 5768 (-)
Type: CAZyme
Location: 3 - 5768 (-)
Gene ID: k141_12295_2
Type: CAZyme
Location: 5838 - 8105 (-)
Type: CAZyme
Location: 5838 - 8105 (-)
Gene ID: k141_12295_3
Type: CAZyme
Location: 8245 - 14559 (-)
Type: CAZyme
Location: 8245 - 14559 (-)
Gene ID: k141_12295_4
Type: TC
Location: 14828 - 16810 (-)
Type: TC
Location: 14828 - 16810 (-)
Gene ID: k141_12295_5
Type: CAZyme
Location: 17118 - 18170 (-)
Type: CAZyme
Location: 17118 - 18170 (-)
Gene ID: k141_12295_6
Type: STP
Location: 18195 - 19292 (-)
Type: STP
Location: 18195 - 19292 (-)
Gene ID: k141_12295_7
Type:
Location: 19426 - 20574 (-)
Type:
Location: 19426 - 20574 (-)
Gene ID: k141_12295_8
Type: TC
Location: 20754 - 22169 (-)
Type: TC
Location: 20754 - 22169 (-)
Gene ID: k141_12295_9
Type: CAZyme
Location: 22176 - 23141 (-)
Type: CAZyme
Location: 22176 - 23141 (-)
Gene ID: k141_12295_10
Type: pfam
Location: 23141 - 24235 (-)
Type: pfam
Location: 23141 - 24235 (-)
Gene ID: k141_12295_11
Type: CAZyme
Location: 24232 - 24696 (-)
Type: CAZyme
Location: 24232 - 24696 (-)
Gene ID: k141_12295_12
Type: pfam
Location: 24683 - 25303 (-)
Type: pfam
Location: 24683 - 25303 (-)
Gene ID: k141_12295_13
Type: CAZyme
Location: 25278 - 26042 (-)
Type: CAZyme
Location: 25278 - 26042 (-)
Gene ID: k141_12295_14
Type: pfam
Location: 26020 - 26805 (-)
Type: pfam
Location: 26020 - 26805 (-)
Gene ID: k141_12295_15
Type: TC
Location: 26810 - 28177 (-)
Type: TC
Location: 26810 - 28177 (-)
Gene ID: k141_12295_16
Type: TC
Location: 28200 - 28883 (-)
Type: TC
Location: 28200 - 28883 (-)
Gene ID: k141_12295_17
Type: TC
Location: 28893 - 29585 (-)
Type: TC
Location: 28893 - 29585 (-)
Gene ID: k141_12295_18
Type: pfam
Location: 29594 - 30325 (-)
Type: pfam
Location: 29594 - 30325 (-)
Gene ID: k141_12295_19
Type: pfam
Location: 30327 - 31772 (-)
Type: pfam
Location: 30327 - 31772 (-)
Gene ID: k141_12295_20
Type: TC
Location: 31964 - 33922 (-)
Type: TC
Location: 31964 - 33922 (-)
Gene ID: k141_12295_21
Type: TC
Location: 34082 - 36049 (-)
Type: TC
Location: 34082 - 36049 (-)
Gene ID: k141_12295_22
Type: CAZyme
Location: 36219 - 37829 (-)
Type: CAZyme
Location: 36219 - 37829 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus oralis_BM
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.