Cluster: CGMR082473_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082473
- CGC Family ID: CGCFAM_00642
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_345129 | k141_345129_4 | 2581 | 4491 | - | CBM48 | GH13_9 |
| NULL(UNKNOWN) | k141_345129 | k141_345129_5 | 4738 | 5724 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_345129 | k141_345129_6 | 5721 | 6218 | + | Peptidase_A24 |
| TC | k141_345129 | k141_345129_7 | 6203 | 7414 | + | 3.A.7.18.1 |
| pfam | k141_345129 | k141_345129_8 | 7446 | 8141 | + | T2SSF |
| NULL(UNKNOWN) | k141_345129 | k141_345129_9 | 8154 | 9380 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_345129 | k141_345129_10 | 9411 | 9581 | + | 1.E.52.1.1 |
Gene ID: k141_345129_4
Type: CAZyme
Location: 2581 - 4491 (-)
Type: CAZyme
Location: 2581 - 4491 (-)
Gene ID: k141_345129_5
Type:
Location: 4738 - 5724 (+)
Type:
Location: 4738 - 5724 (+)
Gene ID: k141_345129_6
Type: pfam
Location: 5721 - 6218 (+)
Type: pfam
Location: 5721 - 6218 (+)
Gene ID: k141_345129_7
Type: TC
Location: 6203 - 7414 (+)
Type: TC
Location: 6203 - 7414 (+)
Gene ID: k141_345129_8
Type: pfam
Location: 7446 - 8141 (+)
Type: pfam
Location: 7446 - 8141 (+)
Gene ID: k141_345129_9
Type:
Location: 8154 - 9380 (+)
Type:
Location: 8154 - 9380 (+)
Gene ID: k141_345129_10
Type: TC
Location: 9411 - 9581 (+)
Type: TC
Location: 9411 - 9581 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
F0428
Species
F0428 sp003043955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.