Cluster: CGMR082473_CGC2
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082473
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_300134 | k141_300134_7 | 3627 | 4349 | - | 3.A.1.5.22 |
| TC | k141_300134 | k141_300134_8 | 4340 | 5128 | - | 3.A.1.5.43 |
| TC | k141_300134 | k141_300134_9 | 5129 | 6622 | - | 3.A.1.5.20 |
| TC | k141_300134 | k141_300134_10 | 6619 | 7410 | - | 3.A.1.5.22 |
| TC | k141_300134 | k141_300134_11 | 7394 | 8344 | - | 3.A.1.5.33 |
| pfam | k141_300134 | k141_300134_12 | 8362 | 9561 | - | tRNA-synt_2c | tRNA_SAD |
| TC | k141_300134 | k141_300134_13 | 9565 | 10908 | - | 2.A.66.1.33 |
| STP | k141_300134 | k141_300134_14 | 10909 | 11400 | - | HD |
| NULL(UNKNOWN) | k141_300134 | k141_300134_15 | 11537 | 12217 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_300134 | k141_300134_16 | 12256 | 13275 | - | GT2 |
| pfam | k141_300134 | k141_300134_17 | 13392 | 14327 | + | AA_kinase |
| pfam | k141_300134 | k141_300134_18 | 14378 | 14782 | - | 4HBT | 4HBT_2 |
| TC | k141_300134 | k141_300134_19 | 14779 | 16023 | - | 2.A.79.1.5 |
Gene ID: k141_300134_7
Type: TC
Location: 3627 - 4349 (-)
Type: TC
Location: 3627 - 4349 (-)
Gene ID: k141_300134_8
Type: TC
Location: 4340 - 5128 (-)
Type: TC
Location: 4340 - 5128 (-)
Gene ID: k141_300134_9
Type: TC
Location: 5129 - 6622 (-)
Type: TC
Location: 5129 - 6622 (-)
Gene ID: k141_300134_10
Type: TC
Location: 6619 - 7410 (-)
Type: TC
Location: 6619 - 7410 (-)
Gene ID: k141_300134_11
Type: TC
Location: 7394 - 8344 (-)
Type: TC
Location: 7394 - 8344 (-)
Gene ID: k141_300134_12
Type: pfam
Location: 8362 - 9561 (-)
Type: pfam
Location: 8362 - 9561 (-)
Gene ID: k141_300134_13
Type: TC
Location: 9565 - 10908 (-)
Type: TC
Location: 9565 - 10908 (-)
Gene ID: k141_300134_14
Type: STP
Location: 10909 - 11400 (-)
Type: STP
Location: 10909 - 11400 (-)
Gene ID: k141_300134_15
Type:
Location: 11537 - 12217 (+)
Type:
Location: 11537 - 12217 (+)
Gene ID: k141_300134_16
Type: CAZyme
Location: 12256 - 13275 (-)
Type: CAZyme
Location: 12256 - 13275 (-)
Gene ID: k141_300134_17
Type: pfam
Location: 13392 - 14327 (+)
Type: pfam
Location: 13392 - 14327 (+)
Gene ID: k141_300134_18
Type: pfam
Location: 14378 - 14782 (-)
Type: pfam
Location: 14378 - 14782 (-)
Gene ID: k141_300134_19
Type: TC
Location: 14779 - 16023 (-)
Type: TC
Location: 14779 - 16023 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
F0428
Species
F0428 sp003043955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.