Cluster: CGMR082473_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082473
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_310530 | k141_310530_20 | 18422 | 20938 | + | 2.A.1.3.35 |
| pfam | k141_310530 | k141_310530_21 | 21136 | 22245 | - | Chorismate_synt |
| pfam | k141_310530 | k141_310530_22 | 22247 | 23299 | - | Lactonase |
| TC | k141_310530 | k141_310530_23 | 23438 | 23689 | + | 3.A.1.11.8 |
| NULL(UNKNOWN) | k141_310530 | k141_310530_24 | 23631 | 24455 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_310530 | k141_310530_25 | 24468 | 25964 | + | GH32 |
Gene ID: k141_310530_20
Type: TC
Location: 18422 - 20938 (+)
Type: TC
Location: 18422 - 20938 (+)
Gene ID: k141_310530_21
Type: pfam
Location: 21136 - 22245 (-)
Type: pfam
Location: 21136 - 22245 (-)
Gene ID: k141_310530_22
Type: pfam
Location: 22247 - 23299 (-)
Type: pfam
Location: 22247 - 23299 (-)
Gene ID: k141_310530_23
Type: TC
Location: 23438 - 23689 (+)
Type: TC
Location: 23438 - 23689 (+)
Gene ID: k141_310530_24
Type:
Location: 23631 - 24455 (+)
Type:
Location: 23631 - 24455 (+)
Gene ID: k141_310530_25
Type: CAZyme
Location: 24468 - 25964 (+)
Type: CAZyme
Location: 24468 - 25964 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
F0428
Species
F0428 sp003043955
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.