Cluster: CGMR082428_CGC5
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR082428
- CGC Family ID: CGCFAM_02806
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6693 | k141_6693_23 | 19392 | 21275 | + | 9.B.106.2.2 |
| TC | k141_6693 | k141_6693_24 | 21383 | 22141 | + | 2.A.79.1.5 |
| pfam | k141_6693 | k141_6693_25 | 22143 | 22592 | + | ThrE_2 |
| pfam | k141_6693 | k141_6693_26 | 22770 | 23942 | + | Chal_sti_synt_N | HMG_CoA_synt_N | HMG_CoA_synt_C | HMG_CoA_synt_C |
| TC | k141_6693 | k141_6693_27 | 23942 | 25216 | + | 2.A.6.6.11 |
| TF | k141_6693 | k141_6693_28 | 25253 | 26218 | - | LacI |
| CAZyme | k141_6693 | k141_6693_29 | 26199 | 27653 | - | GH32 |
| TC | k141_6693 | k141_6693_30 | 28015 | 29898 | + | 4.A.1.2.12 |
| pfam | k141_6693 | k141_6693_31 | 30206 | 31093 | + | ROK |
| TC | k141_6693 | k141_6693_32 | 31134 | 32324 | - | 2.A.4.7.6 |
| NULL(UNKNOWN) | k141_6693 | k141_6693_33 | 32552 | 33913 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_6693 | k141_6693_34 | 33923 | 34891 | + | GT2 |
| TC | k141_6693 | k141_6693_35 | 35082 | 37766 | + | 3.A.3.2.28 |
Gene ID: k141_6693_23
Type: TC
Location: 19392 - 21275 (+)
Type: TC
Location: 19392 - 21275 (+)
Gene ID: k141_6693_24
Type: TC
Location: 21383 - 22141 (+)
Type: TC
Location: 21383 - 22141 (+)
Gene ID: k141_6693_25
Type: pfam
Location: 22143 - 22592 (+)
Type: pfam
Location: 22143 - 22592 (+)
Gene ID: k141_6693_26
Type: pfam
Location: 22770 - 23942 (+)
Type: pfam
Location: 22770 - 23942 (+)
Gene ID: k141_6693_27
Type: TC
Location: 23942 - 25216 (+)
Type: TC
Location: 23942 - 25216 (+)
Gene ID: k141_6693_28
Type: TF
Location: 25253 - 26218 (-)
Type: TF
Location: 25253 - 26218 (-)
Gene ID: k141_6693_29
Type: CAZyme
Location: 26199 - 27653 (-)
Type: CAZyme
Location: 26199 - 27653 (-)
Gene ID: k141_6693_30
Type: TC
Location: 28015 - 29898 (+)
Type: TC
Location: 28015 - 29898 (+)
Gene ID: k141_6693_31
Type: pfam
Location: 30206 - 31093 (+)
Type: pfam
Location: 30206 - 31093 (+)
Gene ID: k141_6693_32
Type: TC
Location: 31134 - 32324 (-)
Type: TC
Location: 31134 - 32324 (-)
Gene ID: k141_6693_33
Type:
Location: 32552 - 33913 (+)
Type:
Location: 32552 - 33913 (+)
Gene ID: k141_6693_34
Type: CAZyme
Location: 33923 - 34891 (+)
Type: CAZyme
Location: 33923 - 34891 (+)
Gene ID: k141_6693_35
Type: TC
Location: 35082 - 37766 (+)
Type: TC
Location: 35082 - 37766 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.