Cluster: CGMR082428_CGC4
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 8
- Substrate:
- Genome ID: CGMR082428
- CGC Family ID: CGCFAM_00463
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_4185 | k141_4185_6 | 4186 | 5706 | - | GT4 |
| TC | k141_4185 | k141_4185_7 | 5719 | 8100 | - | 3.A.5.10.1 |
| TC | k141_4185 | k141_4185_8 | 8090 | 8569 | - | 3.A.5.10.1 |
| TC | k141_4185 | k141_4185_9 | 8569 | 10101 | - | 3.A.5.10.1 |
| TC | k141_4185 | k141_4185_10 | 10091 | 11665 | - | 3.A.5.10.1 |
| TC | k141_4185 | k141_4185_11 | 11681 | 12910 | - | 3.A.5.10.1 |
| CAZyme | k141_4185 | k141_4185_12 | 13038 | 14045 | - | GT113 |
| CAZyme | k141_4185 | k141_4185_13 | 14054 | 17272 | - | GT101 | GT8 | GT8 |
| CAZyme | k141_4185 | k141_4185_14 | 17382 | 18272 | - | GT2 |
| CAZyme | k141_4185 | k141_4185_15 | 18473 | 19369 | - | GT2 |
| CAZyme | k141_4185 | k141_4185_16 | 19359 | 20588 | - | GT8 |
| CAZyme | k141_4185 | k141_4185_17 | 20557 | 21804 | - | GT8 |
| CAZyme | k141_4185 | k141_4185_18 | 21903 | 22781 | - | GT2 |
Gene ID: k141_4185_6
Type: CAZyme
Location: 4186 - 5706 (-)
Type: CAZyme
Location: 4186 - 5706 (-)
Gene ID: k141_4185_7
Type: TC
Location: 5719 - 8100 (-)
Type: TC
Location: 5719 - 8100 (-)
Gene ID: k141_4185_8
Type: TC
Location: 8090 - 8569 (-)
Type: TC
Location: 8090 - 8569 (-)
Gene ID: k141_4185_9
Type: TC
Location: 8569 - 10101 (-)
Type: TC
Location: 8569 - 10101 (-)
Gene ID: k141_4185_10
Type: TC
Location: 10091 - 11665 (-)
Type: TC
Location: 10091 - 11665 (-)
Gene ID: k141_4185_11
Type: TC
Location: 11681 - 12910 (-)
Type: TC
Location: 11681 - 12910 (-)
Gene ID: k141_4185_12
Type: CAZyme
Location: 13038 - 14045 (-)
Type: CAZyme
Location: 13038 - 14045 (-)
Gene ID: k141_4185_13
Type: CAZyme
Location: 14054 - 17272 (-)
Type: CAZyme
Location: 14054 - 17272 (-)
Gene ID: k141_4185_14
Type: CAZyme
Location: 17382 - 18272 (-)
Type: CAZyme
Location: 17382 - 18272 (-)
Gene ID: k141_4185_15
Type: CAZyme
Location: 18473 - 19369 (-)
Type: CAZyme
Location: 18473 - 19369 (-)
Gene ID: k141_4185_16
Type: CAZyme
Location: 19359 - 20588 (-)
Type: CAZyme
Location: 19359 - 20588 (-)
Gene ID: k141_4185_17
Type: CAZyme
Location: 20557 - 21804 (-)
Type: CAZyme
Location: 20557 - 21804 (-)
Gene ID: k141_4185_18
Type: CAZyme
Location: 21903 - 22781 (-)
Type: CAZyme
Location: 21903 - 22781 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.