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Cluster: CGMR082352_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_127618 k141_127618_16 16064 17347 - GT4
pfam k141_127618 k141_127618_17 17372 17881 - VTT_dom
TC k141_127618 k141_127618_18 17980 18993 - 9.B.97.1.1
pfam k141_127618 k141_127618_19 18974 20227 - IMS | IMS_C
TC k141_127618 k141_127618_20 20246 22849 - 3.A.9.1.2
TC k141_127618 k141_127618_21 22943 24166 - 9.B.174.1.1
STP k141_127618 k141_127618_22 24303 25406 - Peptidase_M23
pfam k141_127618 k141_127618_23 25427 26377 - FtsX | FtsX_ECD
TC k141_127618 k141_127618_24 26367 27053 - 3.A.1.140.1
pfam k141_127618 k141_127618_25 27088 28179 - HTH_30 | GGDEF_2
CAZyme k141_127618 k141_127618_26 28397 29062 - GT26
Gene ID: k141_127618_16
Type: CAZyme
Location: 16064 - 17347 (-)
Gene ID: k141_127618_17
Type: pfam
Location: 17372 - 17881 (-)
Gene ID: k141_127618_18
Type: TC
Location: 17980 - 18993 (-)
Gene ID: k141_127618_19
Type: pfam
Location: 18974 - 20227 (-)
Gene ID: k141_127618_20
Type: TC
Location: 20246 - 22849 (-)
Gene ID: k141_127618_21
Type: TC
Location: 22943 - 24166 (-)
Gene ID: k141_127618_22
Type: STP
Location: 24303 - 25406 (-)
Gene ID: k141_127618_23
Type: pfam
Location: 25427 - 26377 (-)
Gene ID: k141_127618_24
Type: TC
Location: 26367 - 27053 (-)
Gene ID: k141_127618_25
Type: pfam
Location: 27088 - 28179 (-)
Gene ID: k141_127618_26
Type: CAZyme
Location: 28397 - 29062 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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