Cluster: CGMR082352_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR082352
- CGC Family ID: CGCFAM_04297
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_213607 | k141_213607_54 | 51743 | 52645 | - | 3.A.1.149.1 |
| TF | k141_213607 | k141_213607_55 | 52649 | 53023 | - | GntR |
| pfam | k141_213607 | k141_213607_56 | 53047 | 53784 | - | ABC2_membrane | ABC2_membrane_3 |
| TC | k141_213607 | k141_213607_57 | 53781 | 54632 | - | 3.A.1.144.1 |
| TC | k141_213607 | k141_213607_58 | 54842 | 56551 | + | 9.B.34.1.1 |
| CAZyme | k141_213607 | k141_213607_59 | 56551 | 57678 | + | GT2 |
| CAZyme | k141_213607 | k141_213607_60 | 57668 | 59611 | + | GT2 |
Gene ID: k141_213607_54
Type: TC
Location: 51743 - 52645 (-)
Type: TC
Location: 51743 - 52645 (-)
Gene ID: k141_213607_55
Type: TF
Location: 52649 - 53023 (-)
Type: TF
Location: 52649 - 53023 (-)
Gene ID: k141_213607_56
Type: pfam
Location: 53047 - 53784 (-)
Type: pfam
Location: 53047 - 53784 (-)
Gene ID: k141_213607_57
Type: TC
Location: 53781 - 54632 (-)
Type: TC
Location: 53781 - 54632 (-)
Gene ID: k141_213607_58
Type: TC
Location: 54842 - 56551 (+)
Type: TC
Location: 54842 - 56551 (+)
Gene ID: k141_213607_59
Type: CAZyme
Location: 56551 - 57678 (+)
Type: CAZyme
Location: 56551 - 57678 (+)
Gene ID: k141_213607_60
Type: CAZyme
Location: 57668 - 59611 (+)
Type: CAZyme
Location: 57668 - 59611 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.