Cluster: CGMR082352_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082352
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_267290 | k141_267290_1 | 3 | 3419 | - | GH136 |
| NULL(UNKNOWN) | k141_267290 | k141_267290_2 | 3434 | 4207 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_267290 | k141_267290_3 | 4381 | 5241 | + | HTH_AraC | HTH_AraC |
| TC | k141_267290 | k141_267290_4 | 5258 | 6811 | - | 2.A.21.2.4 |
| pfam | k141_267290 | k141_267290_5 | 6950 | 7840 | - | Transglut_core |
| NULL(UNKNOWN) | k141_267290 | k141_267290_6 | 7862 | 8125 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_267290 | k141_267290_7 | 8393 | 9709 | - | 2.A.66.1.32 |
Gene ID: k141_267290_1
Type: CAZyme
Location: 3 - 3419 (-)
Type: CAZyme
Location: 3 - 3419 (-)
Gene ID: k141_267290_2
Type:
Location: 3434 - 4207 (-)
Type:
Location: 3434 - 4207 (-)
Gene ID: k141_267290_3
Type: TF
Location: 4381 - 5241 (+)
Type: TF
Location: 4381 - 5241 (+)
Gene ID: k141_267290_4
Type: TC
Location: 5258 - 6811 (-)
Type: TC
Location: 5258 - 6811 (-)
Gene ID: k141_267290_5
Type: pfam
Location: 6950 - 7840 (-)
Type: pfam
Location: 6950 - 7840 (-)
Gene ID: k141_267290_6
Type:
Location: 7862 - 8125 (-)
Type:
Location: 7862 - 8125 (-)
Gene ID: k141_267290_7
Type: TC
Location: 8393 - 9709 (-)
Type: TC
Location: 8393 - 9709 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.