Cluster: CGMR082352_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR082352
- CGC Family ID: CGCFAM_00076
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_147025 | k141_147025_2 | 611 | 1456 | - | GT2 |
| pfam | k141_147025 | k141_147025_3 | 1474 | 2613 | - | PS_pyruv_trans |
| CAZyme | k141_147025 | k141_147025_4 | 2636 | 3766 | - | GT4 |
| pfam | k141_147025 | k141_147025_5 | 3763 | 4377 | - | PglD_N |
| TC | k141_147025 | k141_147025_6 | 4374 | 5012 | - | 9.B.18.1.2 |
| pfam | k141_147025 | k141_147025_7 | 5022 | 6281 | - | DegT_DnrJ_EryC1 |
| pfam | k141_147025 | k141_147025_8 | 6351 | 6866 | - | KOW | NusG |
| TC | k141_147025 | k141_147025_9 | 6956 | 8929 | - | 9.B.18.2.1 |
Gene ID: k141_147025_2
Type: CAZyme
Location: 611 - 1456 (-)
Type: CAZyme
Location: 611 - 1456 (-)
Gene ID: k141_147025_3
Type: pfam
Location: 1474 - 2613 (-)
Type: pfam
Location: 1474 - 2613 (-)
Gene ID: k141_147025_4
Type: CAZyme
Location: 2636 - 3766 (-)
Type: CAZyme
Location: 2636 - 3766 (-)
Gene ID: k141_147025_5
Type: pfam
Location: 3763 - 4377 (-)
Type: pfam
Location: 3763 - 4377 (-)
Gene ID: k141_147025_6
Type: TC
Location: 4374 - 5012 (-)
Type: TC
Location: 4374 - 5012 (-)
Gene ID: k141_147025_7
Type: pfam
Location: 5022 - 6281 (-)
Type: pfam
Location: 5022 - 6281 (-)
Gene ID: k141_147025_8
Type: pfam
Location: 6351 - 6866 (-)
Type: pfam
Location: 6351 - 6866 (-)
Gene ID: k141_147025_9
Type: TC
Location: 6956 - 8929 (-)
Type: TC
Location: 6956 - 8929 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Mediterraneibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.