Cluster: CGMR082257_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082257
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_26143 | k141_26143_51 | 60931 | 62289 | + | 2.A.61.1.1 |
| TC | k141_26143 | k141_26143_52 | 62768 | 64027 | + | 2.A.42.2.1 |
| STP | k141_26143 | k141_26143_53 | 64262 | 65536 | + | Aminotran_1_2 |
| CAZyme | k141_26143 | k141_26143_54 | 65971 | 67617 | + | GT83 |
| NULL(UNKNOWN) | k141_26143 | k141_26143_55 | 67718 | 67924 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_26143 | k141_26143_56 | 67921 | 71025 | - | 2.A.6.2.32 |
| TC | k141_26143 | k141_26143_57 | 71036 | 72133 | - | 2.A.6.2.32 |
Gene ID: k141_26143_51
Type: TC
Location: 60931 - 62289 (+)
Type: TC
Location: 60931 - 62289 (+)
Gene ID: k141_26143_52
Type: TC
Location: 62768 - 64027 (+)
Type: TC
Location: 62768 - 64027 (+)
Gene ID: k141_26143_53
Type: STP
Location: 64262 - 65536 (+)
Type: STP
Location: 64262 - 65536 (+)
Gene ID: k141_26143_54
Type: CAZyme
Location: 65971 - 67617 (+)
Type: CAZyme
Location: 65971 - 67617 (+)
Gene ID: k141_26143_55
Type:
Location: 67718 - 67924 (-)
Type:
Location: 67718 - 67924 (-)
Gene ID: k141_26143_56
Type: TC
Location: 67921 - 71025 (-)
Type: TC
Location: 67921 - 71025 (-)
Gene ID: k141_26143_57
Type: TC
Location: 71036 - 72133 (-)
Type: TC
Location: 71036 - 72133 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.