Cluster: CGMR082257_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082257
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_26143 | k141_26143_40 | 47734 | 49092 | + | 2.A.8.1.8 |
| pfam | k141_26143 | k141_26143_41 | 49184 | 50410 | - | Lipase_GDSL | Lipase_GDSL_2 | Ape1_N |
| pfam | k141_26143 | k141_26143_42 | 50361 | 51545 | - | Lipase_GDSL | DUF459 | Lipase_GDSL_2 |
| TC | k141_26143 | k141_26143_43 | 51532 | 52950 | - | 2.A.50.2.1 |
| CAZyme | k141_26143 | k141_26143_44 | 53361 | 54167 | - | GH73 |
Gene ID: k141_26143_40
Type: TC
Location: 47734 - 49092 (+)
Type: TC
Location: 47734 - 49092 (+)
Gene ID: k141_26143_41
Type: pfam
Location: 49184 - 50410 (-)
Type: pfam
Location: 49184 - 50410 (-)
Gene ID: k141_26143_42
Type: pfam
Location: 50361 - 51545 (-)
Type: pfam
Location: 50361 - 51545 (-)
Gene ID: k141_26143_43
Type: TC
Location: 51532 - 52950 (-)
Type: TC
Location: 51532 - 52950 (-)
Gene ID: k141_26143_44
Type: CAZyme
Location: 53361 - 54167 (-)
Type: CAZyme
Location: 53361 - 54167 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.