Cluster: CGMR082257_CGC23
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082257
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_65511 | k141_65511_22 | 26937 | 28604 | - | 3.A.1.120.6 |
| NULL(UNKNOWN) | k141_65511 | k141_65511_23 | 28965 | 30158 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_65511 | k141_65511_24 | 30170 | 30931 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_65511 | k141_65511_25 | 31458 | 33374 | + | GH23 |
Gene ID: k141_65511_22
Type: TC
Location: 26937 - 28604 (-)
Type: TC
Location: 26937 - 28604 (-)
Gene ID: k141_65511_23
Type:
Location: 28965 - 30158 (-)
Type:
Location: 28965 - 30158 (-)
Gene ID: k141_65511_24
Type:
Location: 30170 - 30931 (-)
Type:
Location: 30170 - 30931 (-)
Gene ID: k141_65511_25
Type: CAZyme
Location: 31458 - 33374 (+)
Type: CAZyme
Location: 31458 - 33374 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.