Cluster: CGMR082257_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082257
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_112555 | k141_112555_141 | 137847 | 140558 | - | 3.A.5.1.1 |
| pfam | k141_112555 | k141_112555_142 | 140654 | 141181 | - | SecM |
| pfam | k141_112555 | k141_112555_143 | 141268 | 141789 | + | DciA |
| CAZyme | k141_112555 | k141_112555_144 | 141826 | 142743 | - | CE11 |
Gene ID: k141_112555_141
Type: TC
Location: 137847 - 140558 (-)
Type: TC
Location: 137847 - 140558 (-)
Gene ID: k141_112555_142
Type: pfam
Location: 140654 - 141181 (-)
Type: pfam
Location: 140654 - 141181 (-)
Gene ID: k141_112555_143
Type: pfam
Location: 141268 - 141789 (+)
Type: pfam
Location: 141268 - 141789 (+)
Gene ID: k141_112555_144
Type: CAZyme
Location: 141826 - 142743 (-)
Type: CAZyme
Location: 141826 - 142743 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.