Cluster: CGMR082257_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082257
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1984 | k141_1984_80 | 85300 | 86004 | + | 2.A.95.1.1 |
| CAZyme | k141_1984 | k141_1984_81 | 85998 | 86657 | - | GH23 |
| TC | k141_1984 | k141_1984_82 | 87027 | 87938 | + | 3.A.1.15.4 |
| TC | k141_1984 | k141_1984_83 | 87939 | 88829 | + | 3.A.1.15.4 |
| TC | k141_1984 | k141_1984_84 | 88826 | 89716 | + | 3.A.1.15.4 |
| TC | k141_1984 | k141_1984_85 | 89709 | 90575 | + | 3.A.1.15.4 |
Gene ID: k141_1984_80
Type: TC
Location: 85300 - 86004 (+)
Type: TC
Location: 85300 - 86004 (+)
Gene ID: k141_1984_81
Type: CAZyme
Location: 85998 - 86657 (-)
Type: CAZyme
Location: 85998 - 86657 (-)
Gene ID: k141_1984_82
Type: TC
Location: 87027 - 87938 (+)
Type: TC
Location: 87027 - 87938 (+)
Gene ID: k141_1984_83
Type: TC
Location: 87939 - 88829 (+)
Type: TC
Location: 87939 - 88829 (+)
Gene ID: k141_1984_84
Type: TC
Location: 88826 - 89716 (+)
Type: TC
Location: 88826 - 89716 (+)
Gene ID: k141_1984_85
Type: TC
Location: 89709 - 90575 (+)
Type: TC
Location: 89709 - 90575 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.