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Cluster: CGMR082257_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1984 k141_1984_59 63943 64350 - 2.A.7.22.1
TC k141_1984 k141_1984_60 64347 64694 - 2.A.7.22.1
CAZyme k141_1984 k141_1984_61 64691 66349 - GT83
pfam k141_1984 k141_1984_62 66357 67250 - Polysacc_deac_1
pfam k141_1984 k141_1984_63 67250 69235 - Formyl_trans_N | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
CAZyme k141_1984 k141_1984_64 69235 70227 - GT2
STP k141_1984 k141_1984_65 70227 71372 - Aminotran_1_2
TC k141_1984 k141_1984_66 71497 72264 - 3.A.1.13.1
TC k141_1984 k141_1984_67 72266 73270 - 3.A.1.13.1
Gene ID: k141_1984_59
Type: TC
Location: 63943 - 64350 (-)
Gene ID: k141_1984_60
Type: TC
Location: 64347 - 64694 (-)
Gene ID: k141_1984_61
Type: CAZyme
Location: 64691 - 66349 (-)
Gene ID: k141_1984_62
Type: pfam
Location: 66357 - 67250 (-)
Gene ID: k141_1984_63
Type: pfam
Location: 67250 - 69235 (-)
Gene ID: k141_1984_64
Type: CAZyme
Location: 69235 - 70227 (-)
Gene ID: k141_1984_65
Type: STP
Location: 70227 - 71372 (-)
Gene ID: k141_1984_66
Type: TC
Location: 71497 - 72264 (-)
Gene ID: k141_1984_67
Type: TC
Location: 72266 - 73270 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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