Cluster: CGMR082257_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082257
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_13505 | k141_13505_438 | 453873 | 455216 | - | 2.A.23.1.3 |
| TF | k141_13505 | k141_13505_439 | 456253 | 457476 | - | MarR |
| CAZyme | k141_13505 | k141_13505_440 | 457484 | 458650 | - | CE9 |
| sulfatase | k141_13505 | k141_13505_441 | 458775 | 459578 | - | S1_9 |
| TC | k141_13505 | k141_13505_442 | 459975 | 461960 | + | 4.A.1.1.2 |
Gene ID: k141_13505_438
Type: TC
Location: 453873 - 455216 (-)
Type: TC
Location: 453873 - 455216 (-)
Gene ID: k141_13505_439
Type: TF
Location: 456253 - 457476 (-)
Type: TF
Location: 456253 - 457476 (-)
Gene ID: k141_13505_440
Type: CAZyme
Location: 457484 - 458650 (-)
Type: CAZyme
Location: 457484 - 458650 (-)
Gene ID: k141_13505_441
Type: sulfatase
Location: 458775 - 459578 (-)
Type: sulfatase
Location: 458775 - 459578 (-)
Gene ID: k141_13505_442
Type: TC
Location: 459975 - 461960 (+)
Type: TC
Location: 459975 - 461960 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.