Cluster: CGMR082257_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR082257
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_43881 | k141_43881_9 | 7242 | 8024 | - | GT2 |
| NULL(UNKNOWN) | k141_43881 | k141_43881_10 | 8028 | 9278 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_43881 | k141_43881_11 | 9344 | 10591 | - | GT4 |
| NULL(UNKNOWN) | k141_43881 | k141_43881_12 | 10588 | 11496 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_43881 | k141_43881_13 | 11510 | 12802 | - | 2.A.66.5.2 |
Gene ID: k141_43881_9
Type: CAZyme
Location: 7242 - 8024 (-)
Type: CAZyme
Location: 7242 - 8024 (-)
Gene ID: k141_43881_10
Type:
Location: 8028 - 9278 (-)
Type:
Location: 8028 - 9278 (-)
Gene ID: k141_43881_11
Type: CAZyme
Location: 9344 - 10591 (-)
Type: CAZyme
Location: 9344 - 10591 (-)
Gene ID: k141_43881_12
Type:
Location: 10588 - 11496 (-)
Type:
Location: 10588 - 11496 (-)
Gene ID: k141_43881_13
Type: TC
Location: 11510 - 12802 (-)
Type: TC
Location: 11510 - 12802 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.