Cluster: CGMR082257_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082257
- CGC Family ID: CGCFAM_00060
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_145929 | k141_145929_40 | 36069 | 38150 | - | 8.A.3.3.2 |
| pfam | k141_145929 | k141_145929_41 | 38183 | 38545 | - | LMWPc |
| TC | k141_145929 | k141_145929_42 | 38634 | 39782 | - | 1.B.18.3.1 |
| pfam | k141_145929 | k141_145929_43 | 40106 | 41131 | - | adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | KR | GDP_Man_Dehyd |
| CAZyme | k141_145929 | k141_145929_44 | 41157 | 41864 | - | GT2 |
Gene ID: k141_145929_40
Type: TC
Location: 36069 - 38150 (-)
Type: TC
Location: 36069 - 38150 (-)
Gene ID: k141_145929_41
Type: pfam
Location: 38183 - 38545 (-)
Type: pfam
Location: 38183 - 38545 (-)
Gene ID: k141_145929_42
Type: TC
Location: 38634 - 39782 (-)
Type: TC
Location: 38634 - 39782 (-)
Gene ID: k141_145929_43
Type: pfam
Location: 40106 - 41131 (-)
Type: pfam
Location: 40106 - 41131 (-)
Gene ID: k141_145929_44
Type: CAZyme
Location: 41157 - 41864 (-)
Type: CAZyme
Location: 41157 - 41864 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.