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Cluster: CGMR082257_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_50699 k141_50699_78 92020 93591 + 2.A.68.1.2
TC k141_50699 k141_50699_79 94210 95523 + 3.A.1.1.3
TC k141_50699 k141_50699_80 95593 96480 + 3.A.1.1.3
TC k141_50699 k141_50699_81 96477 97322 + 3.A.1.1.3
TC k141_50699 k141_50699_82 97325 98395 + 3.A.1.1.3
pfam k141_50699 k141_50699_83 98392 99135 + GDPD
pfam k141_50699 k141_50699_84 99344 100303 + Transposase_31
TC k141_50699 k141_50699_85 100402 103635 - 1.B.12.5.3
pfam k141_50699 k141_50699_86 104111 105481 - Lyase_1 | ADSL_C
TC k141_50699 k141_50699_87 105493 107049 - 4.A.1.1.3
TF k141_50699 k141_50699_88 107333 108073 - HTH_6
CAZyme k141_50699 k141_50699_89 108386 109831 - GH32
TC k141_50699 k141_50699_90 109828 111090 - 2.A.1.5.2
Gene ID: k141_50699_78
Type: TC
Location: 92020 - 93591 (+)
Gene ID: k141_50699_79
Type: TC
Location: 94210 - 95523 (+)
Gene ID: k141_50699_80
Type: TC
Location: 95593 - 96480 (+)
Gene ID: k141_50699_81
Type: TC
Location: 96477 - 97322 (+)
Gene ID: k141_50699_82
Type: TC
Location: 97325 - 98395 (+)
Gene ID: k141_50699_83
Type: pfam
Location: 98392 - 99135 (+)
Gene ID: k141_50699_84
Type: pfam
Location: 99344 - 100303 (+)
Gene ID: k141_50699_85
Type: TC
Location: 100402 - 103635 (-)
Gene ID: k141_50699_86
Type: pfam
Location: 104111 - 105481 (-)
Gene ID: k141_50699_87
Type: TC
Location: 105493 - 107049 (-)
Gene ID: k141_50699_88
Type: TF
Location: 107333 - 108073 (-)
Gene ID: k141_50699_89
Type: CAZyme
Location: 108386 - 109831 (-)
Gene ID: k141_50699_90
Type: TC
Location: 109828 - 111090 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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