Cluster: CGMR082257_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082257
- CGC Family ID: CGCFAM_01650
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1385 | k141_1385_30 | 27621 | 28268 | + | 2.A.76.1.5 |
| pfam | k141_1385 | k141_1385_31 | 28356 | 28868 | + | dCMP_cyt_deam_1 | MafB19-deam |
| CAZyme | k141_1385 | k141_1385_32 | 28865 | 30523 | - | GH23 |
Gene ID: k141_1385_30
Type: TC
Location: 27621 - 28268 (+)
Type: TC
Location: 27621 - 28268 (+)
Gene ID: k141_1385_31
Type: pfam
Location: 28356 - 28868 (+)
Type: pfam
Location: 28356 - 28868 (+)
Gene ID: k141_1385_32
Type: CAZyme
Location: 28865 - 30523 (-)
Type: CAZyme
Location: 28865 - 30523 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.