Cluster: CGMR082257_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR082257
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_127557 | k141_127557_24 | 29563 | 30813 | + | 2.A.66.2.3 |
| CAZyme | k141_127557 | k141_127557_25 | 30810 | 31892 | + | GT56 |
| TC | k141_127557 | k141_127557_26 | 31889 | 33244 | + | 9.B.128.1.1 |
| CAZyme | k141_127557 | k141_127557_27 | 33255 | 33992 | + | GT26 |
| TC | k141_127557 | k141_127557_28 | 34226 | 35605 | + | 2.A.3.1.15 |
Gene ID: k141_127557_24
Type: TC
Location: 29563 - 30813 (+)
Type: TC
Location: 29563 - 30813 (+)
Gene ID: k141_127557_25
Type: CAZyme
Location: 30810 - 31892 (+)
Type: CAZyme
Location: 30810 - 31892 (+)
Gene ID: k141_127557_26
Type: TC
Location: 31889 - 33244 (+)
Type: TC
Location: 31889 - 33244 (+)
Gene ID: k141_127557_27
Type: CAZyme
Location: 33255 - 33992 (+)
Type: CAZyme
Location: 33255 - 33992 (+)
Gene ID: k141_127557_28
Type: TC
Location: 34226 - 35605 (+)
Type: TC
Location: 34226 - 35605 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Providencia
Species
Providencia alcalifaciens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.