Cluster: CGMR082198_CGC8
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR082198
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_161509 | k141_161509_36 | 37357 | 38778 | - | 9.B.18.1.3 |
| STP | k141_161509 | k141_161509_37 | 39005 | 39988 | - | Pribosyltran |
| pfam | k141_161509 | k141_161509_38 | 40026 | 41396 | - | Hexapep | NTP_transferase | IspD | CTP_transf_3 | NTP_transf_3 |
| TC | k141_161509 | k141_161509_39 | 41665 | 42510 | - | 3.A.1.15.3 |
| TC | k141_161509 | k141_161509_40 | 42468 | 43163 | - | 3.A.1.15.3 |
| TC | k141_161509 | k141_161509_41 | 43211 | 44128 | - | 3.A.1.15.3 |
| pfam | k141_161509 | k141_161509_42 | 44289 | 45497 | - | Dynamin_N | MMR_HSR1 | AIG1 |
| pfam | k141_161509 | k141_161509_43 | 45527 | 46213 | - | Zn_peptidase_2 |
| TC | k141_161509 | k141_161509_44 | 46478 | 47281 | - | 3.A.1.34.1 |
| TC | k141_161509 | k141_161509_45 | 47283 | 48221 | - | 3.A.1.34.1 |
| pfam | k141_161509 | k141_161509_46 | 48251 | 49210 | - | ABC_sub_bind |
| TC | k141_161509 | k141_161509_47 | 49228 | 50286 | - | 3.A.1.34.1 |
| pfam | k141_161509 | k141_161509_48 | 50651 | 51388 | - | DUF218 |
| pfam | k141_161509 | k141_161509_49 | 51629 | 52660 | - | Aminotran_4 |
| TC | k141_161509 | k141_161509_50 | 52811 | 54619 | - | 3.A.1.135.6 |
| TC | k141_161509 | k141_161509_51 | 54621 | 56762 | - | 3.A.1.135.6 |
| NULL(UNKNOWN) | k141_161509 | k141_161509_52 | 56909 | 57583 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_161509 | k141_161509_53 | 57681 | 58976 | - | Sigma54_DBD | Sigma54_CBD |
| CAZyme | k141_161509 | k141_161509_54 | 59066 | 60451 | - | CE4 |
Gene ID: k141_161509_36
Type: TC
Location: 37357 - 38778 (-)
Type: TC
Location: 37357 - 38778 (-)
Gene ID: k141_161509_37
Type: STP
Location: 39005 - 39988 (-)
Type: STP
Location: 39005 - 39988 (-)
Gene ID: k141_161509_38
Type: pfam
Location: 40026 - 41396 (-)
Type: pfam
Location: 40026 - 41396 (-)
Gene ID: k141_161509_39
Type: TC
Location: 41665 - 42510 (-)
Type: TC
Location: 41665 - 42510 (-)
Gene ID: k141_161509_40
Type: TC
Location: 42468 - 43163 (-)
Type: TC
Location: 42468 - 43163 (-)
Gene ID: k141_161509_41
Type: TC
Location: 43211 - 44128 (-)
Type: TC
Location: 43211 - 44128 (-)
Gene ID: k141_161509_42
Type: pfam
Location: 44289 - 45497 (-)
Type: pfam
Location: 44289 - 45497 (-)
Gene ID: k141_161509_43
Type: pfam
Location: 45527 - 46213 (-)
Type: pfam
Location: 45527 - 46213 (-)
Gene ID: k141_161509_44
Type: TC
Location: 46478 - 47281 (-)
Type: TC
Location: 46478 - 47281 (-)
Gene ID: k141_161509_45
Type: TC
Location: 47283 - 48221 (-)
Type: TC
Location: 47283 - 48221 (-)
Gene ID: k141_161509_46
Type: pfam
Location: 48251 - 49210 (-)
Type: pfam
Location: 48251 - 49210 (-)
Gene ID: k141_161509_47
Type: TC
Location: 49228 - 50286 (-)
Type: TC
Location: 49228 - 50286 (-)
Gene ID: k141_161509_48
Type: pfam
Location: 50651 - 51388 (-)
Type: pfam
Location: 50651 - 51388 (-)
Gene ID: k141_161509_49
Type: pfam
Location: 51629 - 52660 (-)
Type: pfam
Location: 51629 - 52660 (-)
Gene ID: k141_161509_50
Type: TC
Location: 52811 - 54619 (-)
Type: TC
Location: 52811 - 54619 (-)
Gene ID: k141_161509_51
Type: TC
Location: 54621 - 56762 (-)
Type: TC
Location: 54621 - 56762 (-)
Gene ID: k141_161509_52
Type:
Location: 56909 - 57583 (+)
Type:
Location: 56909 - 57583 (+)
Gene ID: k141_161509_53
Type: pfam
Location: 57681 - 58976 (-)
Type: pfam
Location: 57681 - 58976 (-)
Gene ID: k141_161509_54
Type: CAZyme
Location: 59066 - 60451 (-)
Type: CAZyme
Location: 59066 - 60451 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Aerococcaceae
Genus
Facklamia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.