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Cluster: CGMR082198_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_80853 k141_80853_2 633 2156 + 3.A.1.5.20
TC k141_80853 k141_80853_3 2217 3146 + 3.A.1.5.11
TC k141_80853 k141_80853_4 3159 4049 + 3.A.1.5.11
TC k141_80853 k141_80853_5 4061 4984 + 3.A.1.5.20
TC k141_80853 k141_80853_6 4971 5951 + 3.A.1.5.20
TF k141_80853 k141_80853_7 6090 6923 - HTH_AraC | HTH_AraC
TC k141_80853 k141_80853_8 7043 8323 + 3.A.1.1.4
TC k141_80853 k141_80853_9 8410 9282 + 3.A.1.1.4
TC k141_80853 k141_80853_10 9275 10099 + 3.A.1.1.4
CAZyme k141_80853 k141_80853_11 10168 12333 + GH36
Gene ID: k141_80853_2
Type: TC
Location: 633 - 2156 (+)
Gene ID: k141_80853_3
Type: TC
Location: 2217 - 3146 (+)
Gene ID: k141_80853_4
Type: TC
Location: 3159 - 4049 (+)
Gene ID: k141_80853_5
Type: TC
Location: 4061 - 4984 (+)
Gene ID: k141_80853_6
Type: TC
Location: 4971 - 5951 (+)
Gene ID: k141_80853_7
Type: TF
Location: 6090 - 6923 (-)
Gene ID: k141_80853_8
Type: TC
Location: 7043 - 8323 (+)
Gene ID: k141_80853_9
Type: TC
Location: 8410 - 9282 (+)
Gene ID: k141_80853_10
Type: TC
Location: 9275 - 10099 (+)
Gene ID: k141_80853_11
Type: CAZyme
Location: 10168 - 12333 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Aerococcaceae
→
Genus
Facklamia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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