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Cluster: CGMR082063_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_26416 k141_26416_18 21274 22221 - 3.A.15.2.1
TC k141_26416 k141_26416_19 22223 23440 - 3.A.15.2.1
pfam k141_26416 k141_26416_20 23614 23925 - SecG
pfam k141_26416 k141_26416_21 23942 24691 - TIM
TC k141_26416 k141_26416_22 24840 25889 + 9.B.157.1.3
TC k141_26416 k141_26416_23 25897 26778 + 9.B.157.1.3
pfam k141_26416 k141_26416_24 26775 27257 + MreD
peptidase k141_26416 k141_26416_25 27264 29183 + X52.001
TC k141_26416 k141_26416_26 29183 30322 + 2.A.103.1.2
CAZyme k141_26416 k141_26416_27 30319 31362 + GH103
Gene ID: k141_26416_18
Type: TC
Location: 21274 - 22221 (-)
Gene ID: k141_26416_19
Type: TC
Location: 22223 - 23440 (-)
Gene ID: k141_26416_20
Type: pfam
Location: 23614 - 23925 (-)
Gene ID: k141_26416_21
Type: pfam
Location: 23942 - 24691 (-)
Gene ID: k141_26416_22
Type: TC
Location: 24840 - 25889 (+)
Gene ID: k141_26416_23
Type: TC
Location: 25897 - 26778 (+)
Gene ID: k141_26416_24
Type: pfam
Location: 26775 - 27257 (+)
Gene ID: k141_26416_25
Type: peptidase
Location: 27264 - 29183 (+)
Gene ID: k141_26416_26
Type: TC
Location: 29183 - 30322 (+)
Gene ID: k141_26416_27
Type: CAZyme
Location: 30319 - 31362 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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