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Cluster: CGMR081981_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_31525 k141_31525_6 5116 5907 - 3.A.1.141.1
pfam k141_31525 k141_31525_7 5913 6827 - ABC2_membrane_6
TC k141_31525 k141_31525_8 6824 7828 - 3.A.1.141.1
TF k141_31525 k141_31525_9 7981 8982 + HTH_3 | MerR | MerR
pfam k141_31525 k141_31525_10 9067 9930 + AA_kinase
TC k141_31525 k141_31525_11 10272 12047 - 2.A.58.2.2
STP k141_31525 k141_31525_12 12169 13827 - HATPase_c | HisKA | PAS
TF k141_31525 k141_31525_13 13830 14501 - Trans_reg_C
CAZyme k141_31525 k141_31525_14 14578 15639 - GH179
Gene ID: k141_31525_6
Type: TC
Location: 5116 - 5907 (-)
Gene ID: k141_31525_7
Type: pfam
Location: 5913 - 6827 (-)
Gene ID: k141_31525_8
Type: TC
Location: 6824 - 7828 (-)
Gene ID: k141_31525_9
Type: TF
Location: 7981 - 8982 (+)
Gene ID: k141_31525_10
Type: pfam
Location: 9067 - 9930 (+)
Gene ID: k141_31525_11
Type: TC
Location: 10272 - 12047 (-)
Gene ID: k141_31525_12
Type: STP
Location: 12169 - 13827 (-)
Gene ID: k141_31525_13
Type: TF
Location: 13830 - 14501 (-)
Gene ID: k141_31525_14
Type: CAZyme
Location: 14578 - 15639 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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