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Cluster: CGMR081981_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_22556 k141_22556_34 40334 41026 + 3.A.1.122.14
TC k141_22556 k141_22556_35 41016 42035 + 3.A.1.122.14
pfam k141_22556 k141_22556_36 42139 43854 + MatE | Polysacc_synt
CAZyme k141_22556 k141_22556_37 44216 46399 - GH36
pfam k141_22556 k141_22556_38 46440 47279 - GDPD | DUF4996
CAZyme k141_22556 k141_22556_39 47307 48596 - GH140
pfam k141_22556 k141_22556_40 48726 49940 - IspD | YgbB | NTP_transf_3
STP k141_22556 k141_22556_41 50087 50545 + GyrI-like
CAZyme k141_22556 k141_22556_42 50793 52910 + GH106
Gene ID: k141_22556_34
Type: TC
Location: 40334 - 41026 (+)
Gene ID: k141_22556_35
Type: TC
Location: 41016 - 42035 (+)
Gene ID: k141_22556_36
Type: pfam
Location: 42139 - 43854 (+)
Gene ID: k141_22556_37
Type: CAZyme
Location: 44216 - 46399 (-)
Gene ID: k141_22556_38
Type: pfam
Location: 46440 - 47279 (-)
Gene ID: k141_22556_39
Type: CAZyme
Location: 47307 - 48596 (-)
Gene ID: k141_22556_40
Type: pfam
Location: 48726 - 49940 (-)
Gene ID: k141_22556_41
Type: STP
Location: 50087 - 50545 (+)
Gene ID: k141_22556_42
Type: CAZyme
Location: 50793 - 52910 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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