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Cluster: CGMR081981_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_128176 k141_128176_4 6219 8051 - GH146
pfam k141_128176 k141_128176_5 8180 9166 - PRK | CbiA | nSTAND3
TC k141_128176 k141_128176_6 9356 11002 - 4.C.1.1.6
TF k141_128176 k141_128176_7 10999 11574 - HTH_3
pfam k141_128176 k141_128176_8 12098 12850 - Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme k141_128176 k141_128176_9 12924 15881 - GH106
pfam k141_128176 k141_128176_10 16183 16398 + PC4
pfam k141_128176 k141_128176_11 16545 17891 - ELFV_dehydrog | ELFV_dehydrog_N
CAZyme k141_128176 k141_128176_12 18272 19531 - GH109
Gene ID: k141_128176_4
Type: CAZyme
Location: 6219 - 8051 (-)
Gene ID: k141_128176_5
Type: pfam
Location: 8180 - 9166 (-)
Gene ID: k141_128176_6
Type: TC
Location: 9356 - 11002 (-)
Gene ID: k141_128176_7
Type: TF
Location: 10999 - 11574 (-)
Gene ID: k141_128176_8
Type: pfam
Location: 12098 - 12850 (-)
Gene ID: k141_128176_9
Type: CAZyme
Location: 12924 - 15881 (-)
Gene ID: k141_128176_10
Type: pfam
Location: 16183 - 16398 (+)
Gene ID: k141_128176_11
Type: pfam
Location: 16545 - 17891 (-)
Gene ID: k141_128176_12
Type: CAZyme
Location: 18272 - 19531 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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