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Cluster: CGMR081945_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_4042 k141_4042_21 20939 21622 + GT26
TC k141_4042 k141_4042_22 21652 22479 + 2.A.115.1.1
pfam k141_4042 k141_4042_23 22640 23728 + HTH_30 | GGDEF_2
TC k141_4042 k141_4042_24 23761 24444 + 3.A.1.140.1
pfam k141_4042 k141_4042_25 24434 25354 + FtsX | FtsX_ECD
TC k141_4042 k141_4042_26 25434 26612 + 9.B.174.1.1
pfam k141_4042 k141_4042_27 26648 27469 + Lactamase_B | Lactamase_B_2
TC k141_4042 k141_4042_28 27538 30126 + 9.B.34.1.3
Gene ID: k141_4042_21
Type: CAZyme
Location: 20939 - 21622 (+)
Gene ID: k141_4042_22
Type: TC
Location: 21652 - 22479 (+)
Gene ID: k141_4042_23
Type: pfam
Location: 22640 - 23728 (+)
Gene ID: k141_4042_24
Type: TC
Location: 23761 - 24444 (+)
Gene ID: k141_4042_25
Type: pfam
Location: 24434 - 25354 (+)
Gene ID: k141_4042_26
Type: TC
Location: 25434 - 26612 (+)
Gene ID: k141_4042_27
Type: pfam
Location: 26648 - 27469 (+)
Gene ID: k141_4042_28
Type: TC
Location: 27538 - 30126 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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