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Cluster: CGMR081945_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_39159 k141_39159_81 93021 94406 + 2.A.66.1.32
TC k141_39159 k141_39159_82 94410 94997 + 2.A.115.2.14
pfam k141_39159 k141_39159_83 95061 96395 - MatE | MatE
TC k141_39159 k141_39159_84 96742 98085 + 2.A.66.1.7
pfam k141_39159 k141_39159_85 98497 99282 + Fic
TC k141_39159 k141_39159_86 99822 100832 + 3.A.1.2.15
TC k141_39159 k141_39159_87 100843 102333 + 3.A.1.2.19
TC k141_39159 k141_39159_88 102343 103302 + 3.A.1.2.13
TC k141_39159 k141_39159_89 103375 104397 + 3.A.1.2.14
peptidase k141_39159 k141_39159_90 104417 105574 + M24.008
TC k141_39159 k141_39159_91 105672 107150 + 3.A.1.2.20
TF k141_39159 k141_39159_92 107164 108741 + HTH_AraC | HTH_AraC
TC k141_39159 k141_39159_93 108741 109769 + 8.A.59.2.1
pfam k141_39159 k141_39159_94 109980 110414 + HSP20
pfam k141_39159 k141_39159_95 110532 111068 + DUF2284
TC k141_39159 k141_39159_96 111100 112668 + 2.A.1.15.16
TF k141_39159 k141_39159_97 112957 113427 + MarR
TC k141_39159 k141_39159_98 113390 115141 + 3.A.1.135.5
TC k141_39159 k141_39159_99 115141 117054 + 3.A.1.135.5
pfam k141_39159 k141_39159_100 117249 118070 + N_methyl | PilJ_C
TC k141_39159 k141_39159_101 118130 119497 + 2.A.66.1.32
CAZyme k141_39159 k141_39159_102 119689 120504 - CE4
Gene ID: k141_39159_81
Type: TC
Location: 93021 - 94406 (+)
Gene ID: k141_39159_82
Type: TC
Location: 94410 - 94997 (+)
Gene ID: k141_39159_83
Type: pfam
Location: 95061 - 96395 (-)
Gene ID: k141_39159_84
Type: TC
Location: 96742 - 98085 (+)
Gene ID: k141_39159_85
Type: pfam
Location: 98497 - 99282 (+)
Gene ID: k141_39159_86
Type: TC
Location: 99822 - 100832 (+)
Gene ID: k141_39159_87
Type: TC
Location: 100843 - 102333 (+)
Gene ID: k141_39159_88
Type: TC
Location: 102343 - 103302 (+)
Gene ID: k141_39159_89
Type: TC
Location: 103375 - 104397 (+)
Gene ID: k141_39159_90
Type: peptidase
Location: 104417 - 105574 (+)
Gene ID: k141_39159_91
Type: TC
Location: 105672 - 107150 (+)
Gene ID: k141_39159_92
Type: TF
Location: 107164 - 108741 (+)
Gene ID: k141_39159_93
Type: TC
Location: 108741 - 109769 (+)
Gene ID: k141_39159_94
Type: pfam
Location: 109980 - 110414 (+)
Gene ID: k141_39159_95
Type: pfam
Location: 110532 - 111068 (+)
Gene ID: k141_39159_96
Type: TC
Location: 111100 - 112668 (+)
Gene ID: k141_39159_97
Type: TF
Location: 112957 - 113427 (+)
Gene ID: k141_39159_98
Type: TC
Location: 113390 - 115141 (+)
Gene ID: k141_39159_99
Type: TC
Location: 115141 - 117054 (+)
Gene ID: k141_39159_100
Type: pfam
Location: 117249 - 118070 (+)
Gene ID: k141_39159_101
Type: TC
Location: 118130 - 119497 (+)
Gene ID: k141_39159_102
Type: CAZyme
Location: 119689 - 120504 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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