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Cluster: CGMR081609_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_193120 k141_193120_40 42666 44114 - 3.A.1.106.2
NULL(UNKNOWN) k141_193120 k141_193120_41 44123 44455 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_193120 k141_193120_42 44478 45242 - DUF2400
TC k141_193120 k141_193120_43 45258 45926 - 3.A.1.125.1
NULL(UNKNOWN) k141_193120 k141_193120_44 45969 46787 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_193120 k141_193120_45 46801 48273 - 2.A.36.6.4
NULL(UNKNOWN) k141_193120 k141_193120_46 48326 48817 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_193120 k141_193120_47 48944 50437 - 2.A.102.4.10
pfam k141_193120 k141_193120_48 50632 51411 + DAP_epimerase | DAP_epimerase
pfam k141_193120 k141_193120_49 51440 52462 + YceG
CAZyme k141_193120 k141_193120_50 52476 54122 - GT83
Gene ID: k141_193120_40
Type: TC
Location: 42666 - 44114 (-)
Gene ID: k141_193120_41
Type:
Location: 44123 - 44455 (-)
Gene ID: k141_193120_42
Type: pfam
Location: 44478 - 45242 (-)
Gene ID: k141_193120_43
Type: TC
Location: 45258 - 45926 (-)
Gene ID: k141_193120_44
Type:
Location: 45969 - 46787 (-)
Gene ID: k141_193120_45
Type: TC
Location: 46801 - 48273 (-)
Gene ID: k141_193120_46
Type:
Location: 48326 - 48817 (-)
Gene ID: k141_193120_47
Type: TC
Location: 48944 - 50437 (-)
Gene ID: k141_193120_48
Type: pfam
Location: 50632 - 51411 (+)
Gene ID: k141_193120_49
Type: pfam
Location: 51440 - 52462 (+)
Gene ID: k141_193120_50
Type: CAZyme
Location: 52476 - 54122 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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