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Cluster: CGMR081609_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_193120 k141_193120_26 27801 29024 + 9.B.146.1.6
pfam k141_193120 k141_193120_27 29025 30359 + Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N
TC k141_193120 k141_193120_28 30370 31575 + 2.A.103.1.2
CAZyme k141_193120 k141_193120_29 31550 32656 + GT28
pfam k141_193120 k141_193120_30 32653 33993 + Mur_ligase | Mur_ligase_C | Mur_ligase_M
NULL(UNKNOWN) k141_193120 k141_193120_31 33983 34723 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_193120 k141_193120_32 34713 36062 + 9.B.157.1.3
Gene ID: k141_193120_26
Type: TC
Location: 27801 - 29024 (+)
Gene ID: k141_193120_27
Type: pfam
Location: 29025 - 30359 (+)
Gene ID: k141_193120_28
Type: TC
Location: 30370 - 31575 (+)
Gene ID: k141_193120_29
Type: CAZyme
Location: 31550 - 32656 (+)
Gene ID: k141_193120_30
Type: pfam
Location: 32653 - 33993 (+)
Gene ID: k141_193120_31
Type:
Location: 33983 - 34723 (+)
Gene ID: k141_193120_32
Type: TC
Location: 34713 - 36062 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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