dbCAN Logo

Cluster: CGMR081609_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_297307 k141_297307_49 45588 48098 + 3.A.3.30.2
TC k141_297307 k141_297307_50 48425 49063 - 2.A.53.3.8
TC k141_297307 k141_297307_51 49138 50178 - 2.A.16.4.5
TC k141_297307 k141_297307_52 50354 51121 - 3.D.10.1.5
TC k141_297307 k141_297307_53 51159 53171 - 3.D.10.1.5
TC k141_297307 k141_297307_54 53171 53797 - 3.D.10.1.5
CAZyme k141_297307 k141_297307_55 54131 55273 - GT4
pfam k141_297307 k141_297307_56 55384 57054 - WG_beta_rep
pfam k141_297307 k141_297307_57 57115 57771 - Lysine_decarbox | LDcluster4
CAZyme k141_297307 k141_297307_58 57785 60670 - GH3
Gene ID: k141_297307_49
Type: TC
Location: 45588 - 48098 (+)
Gene ID: k141_297307_50
Type: TC
Location: 48425 - 49063 (-)
Gene ID: k141_297307_51
Type: TC
Location: 49138 - 50178 (-)
Gene ID: k141_297307_52
Type: TC
Location: 50354 - 51121 (-)
Gene ID: k141_297307_53
Type: TC
Location: 51159 - 53171 (-)
Gene ID: k141_297307_54
Type: TC
Location: 53171 - 53797 (-)
Gene ID: k141_297307_55
Type: CAZyme
Location: 54131 - 55273 (-)
Gene ID: k141_297307_56
Type: pfam
Location: 55384 - 57054 (-)
Gene ID: k141_297307_57
Type: pfam
Location: 57115 - 57771 (-)
Gene ID: k141_297307_58
Type: CAZyme
Location: 57785 - 60670 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List