Cluster: CGMR081389_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR081389
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_225664 | k141_225664_13 | 13289 | 14359 | - | GT28 |
| TC | k141_225664 | k141_225664_14 | 14352 | 15572 | - | 2.A.103.1.1 |
| pfam | k141_225664 | k141_225664_15 | 15569 | 16891 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | k141_225664 | k141_225664_16 | 16898 | 17392 | - | 9.B.146.1.6 |
Gene ID: k141_225664_13
Type: CAZyme
Location: 13289 - 14359 (-)
Type: CAZyme
Location: 13289 - 14359 (-)
Gene ID: k141_225664_14
Type: TC
Location: 14352 - 15572 (-)
Type: TC
Location: 14352 - 15572 (-)
Gene ID: k141_225664_15
Type: pfam
Location: 15569 - 16891 (-)
Type: pfam
Location: 15569 - 16891 (-)
Gene ID: k141_225664_16
Type: TC
Location: 16898 - 17392 (-)
Type: TC
Location: 16898 - 17392 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Thiopseudomonas
Species
Thiopseudomonas denitrificans
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.